iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099896

Ensembl Protein ID

POPTR_0019s08650.1

UniProt Accession

B9IQ60; B9IQ60_POPTR

Genbank Protein ID

EEF00310.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000355

Gene Name

POPTRDRAFT_1108254; POPTR_0019s08650g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0019s08650	POPTR_0019s08650.1	POPTR_0019s08650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.40e-08	33.5	268	333

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
            + +p+++ lM d ++lp+G+++ +  ++      +k c  ++q+++e+++ Pnl+lr  +qa+  e+
   Q: 268  ILSDPVTGALMDDAMILPCGHSFGAGGMQHV--IRMKVCYSCSQSISEDSIAPNLSLRYAVQAFQREE 333
           578*************************874..45566*************************98775 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSTEEISLVS PQNGINSQLL FQDDPLRFSC TGPPPQQQQQ RRVGDPKTRE LTGFIDDNKL 60
FSSTTTATAT STAGSDRYFP SHHHHHHQDF PRNVYQREPQ GTSGDDTDGE DDEDDEEDDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTCTCTCAC TCTCTCTCTC ATATGGAAAC AAACCCCCAA ATTCCTTCAA ATTAGGGTTT 60
GATTTCGTCC ATGTAAATTC AAATAGAAAA GGCAAAGAGA AATGTCAACA GAGGAAATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0019s08650g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000192	Aegilops tauschii	55.60	2.00e-62	232.00
IUUC-Atr-002682	Amborella trichopoda	66.25	7.00e-78	283.00
IUUC-Aly-005602	Arabidopsis lyrata	61.51	1.00e-74	272.00
IUUC-Ath-006823	Arabidopsis thaliana	60.67	4.00e-78	284.00
IUUC-Bdi-014337	Brachypodium distachyon	65.80	4.00e-68	251.00
IUUC-Bol-015470	Brassica oleracea	59.40	3.00e-74	271.00
IUUC-Bra-017015	Brassica rapa	61.16	2.00e-78	285.00
IUUC-Gma-042808	Glycine max	75.53	3.00e-96	345.00
IUUC-Hvu-047241	Hordeum vulgare	61.64	4.00e-23	98.60
IUUC-Mtr-058650	Medicago truncatula	73.53	5.00e-96	344.00
IUUC-Mac-065387	Musa acuminata	62.61	6.00e-82	297.00
IUUC-Oba-075942	Oryza barthii	64.93	3.00e-71	261.00
IUUC-Obr-076573	Oryza brachyantha	64.93	8.00e-71	259.00
IUUC-Ogl-077795	Oryza glaberrima	61.43	3.00e-68	251.00
IUUC-Ogu-078142	Oryza glumaepatula	64.93	2.00e-71	262.00
IUUC-Ome-081788	Oryza meridionalis	55.92	4.00e-56	212.00
IUUC-Oni-082512	Oryza nivara	68.39	8.00e-71	261.00
IUUC-Opu-083147	Oryza punctata	63.98	2.00e-70	258.00
IUUC-Oru-085135	Oryza rufipogon	68.39	8.00e-71	261.00
IUUC-Ppa-095972	Physcomitrella patens	59.76	4.00e-55	208.00
IUUC-Ppe-101532	Prunus persica	83.61	4.00e-111	394.00
IUUC-Spo-108182	Schizosaccharomyces pombe	32.39	2.00e-05	42.40
IUUC-Smo-109655	Selaginella moellendorffii	54.49	1.00e-46	179.00
IUUC-Sly-111788	Solanum lycopersicum	74.26	1.00e-100	359.00
IUUC-Stu-112107	Solanum tuberosum	77.22	7.00e-105	373.00
IUUC-Sbi-113910	Sorghum bicolor	62.74	6.00e-61	227.00
IUUC-Tca-121309	Theobroma cacao	70.43	1.00e-112	399.00
IUUC-Tae-125313	Triticum aestivum	61.50	1.00e-67	249.00
IUUC-Vvi-131465	Vitis vinifera	71.38	9.00e-112	396.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence