iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104669

Ensembl Protein ID

EDU46438

UniProt Accession

B2W2F2; B2W2F2_PYRTR

Genbank Protein ID

EDU46438.1

Protein Name

TFIIH basal transcription factor complex p44 subunit

Genbank Nucleotide ID

DS231617

Gene Name

PTRG_03600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_03600	EDU46438	EDU46438

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	46.76	3.00e-89	323.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MADSDYDFED EGSDDEYVGN KSGTSSTRAQ STTASKRRKV EVPVKEAPRR QAWETEDSRT 60
VAKTIQTAED DTLGQSVQER EEERKRKRLR KDTKPFQRGI IRHVVLVLDL SEAMLEKDMR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGACT CAGACTACGA CTTTGAGGAT GAGGGATCTG ATGATGAGTA CGTCGGGAAC 60
AAGAGCGGGA CTTCCAGTAC CCGCGCGCAA TCTACCACAG CTAGCAAAAG GCGGAAAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A

PROSITE

PS50234--VWFA

Pfam

PF04056--Ssl1

SMART

SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005829--C:cytosol
GO:0006289--P:nucleotide-excision repair
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	36.15	2.00e-43	167.00
IUUC-Aml-002041	Ailuropoda melanoleuca	34.32	7.00e-53	199.00
IUUC-Atr-003056	Amborella trichopoda	39.18	1.00e-55	207.00
IUUC-Apl-003464	Anas platyrhynchos	36.48	2.00e-49	187.00
IUUC-Aca-004745	Anolis carolinensis	34.86	1.00e-54	205.00
IUUC-Aly-005559	Arabidopsis lyrata	38.92	1.00e-62	231.00
IUUC-Ath-007556	Arabidopsis thaliana	38.92	1.00e-62	231.00
IUUC-Ago-007851	Ashbya gossypii	46.22	5.00e-86	309.00
IUUC-Acl-008100	Aspergillus clavatus	48.38	6.00e-109	385.00
IUUC-Afl-008649	Aspergillus flavus	58.89	2.00e-24	101.00
IUUC-Afu-009066	Aspergillus fumigatus	48.84	1.00e-113	401.00
IUUC-Ani-009372	Aspergillus nidulans	50.84	5.00e-113	399.00
IUUC-Ang-009726	Aspergillus niger	47.92	9.00e-115	405.00
IUUC-Aor-010135	Aspergillus oryzae	47.45	6.00e-107	379.00
IUUC-Ate-010399	Aspergillus terreus	46.48	1.00e-40	157.00
IUUC-Ame-011618	Astyanax mexicanus	35.82	3.00e-56	210.00
IUUC-Bgr-012154	Blumeria graminis	46.05	1.00e-109	388.00
IUUC-Bta-012353	Bos taurus	33.24	2.00e-54	204.00
IUUC-Bci-013932	Botrytis cinerea	47.43	1.00e-111	394.00
IUUC-Bdi-014391	Brachypodium distachyon	38.02	6.00e-59	219.00
IUUC-Bol-015128	Brassica oleracea	39.24	3.00e-63	233.00
IUUC-Bra-017932	Brassica rapa	39.24	4.00e-63	233.00
IUUC-Cel-018649	Caenorhabditis elegans	33.45	1.00e-39	155.00
IUUC-Cja-018776	Callithrix jacchus	34.32	5.00e-53	199.00
IUUC-Cfa-020584	Canis familiaris	34.05	2.00e-52	197.00
IUUC-Cpo-021300	Cavia porcellus	33.78	3.00e-52	197.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	38.05	2.00e-50	191.00
IUUC-Csa-024092	Chlorocebus sabaeus	34.32	4.00e-53	200.00
IUUC-Cho-024919	Choloepus hoffmanni	33.48	5.00e-24	102.00
IUUC-Cin-025386	Ciona intestinalis	34.13	1.00e-52	198.00
IUUC-Csv-026295	Ciona savignyi	30.90	2.00e-48	184.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	48.90	1.00e-99	355.00
IUUC-Cne-026956	Cryptococcus neoformans	37.90	4.00e-62	230.00
IUUC-Cme-027150	Cyanidioschyzon merolae	34.46	6.00e-39	153.00
IUUC-Dre-027962	Danio rerio	34.05	1.00e-55	208.00
IUUC-Dno-029979	Dasypus novemcinctus	36.08	7.00e-51	192.00
IUUC-Dse-031405	Dothistroma septosporum	60.94	3.00e-117	413.00
IUUC-Dme-031710	Drosophila melanogaster	31.94	5.00e-50	189.00
IUUC-Ete-032631	Echinops telfairi	32.51	6.00e-49	186.00
IUUC-Eca-034054	Equus caballus	33.78	1.00e-54	205.00
IUUC-Fca-035724	Felis catus	35.12	5.00e-47	179.00
IUUC-Fal-036987	Ficedula albicollis	36.04	5.00e-56	209.00
IUUC-Fox-037692	Fusarium oxysporum	46.31	5.00e-110	389.00
IUUC-Fso-038442	Fusarium solani	52.69	4.00e-102	363.00
IUUC-Gmo-039273	Gadus morhua	34.46	4.00e-53	200.00
IUUC-Ggr-040009	Gaeumannomyces graminis	44.78	1.00e-94	338.00
IUUC-Gga-041089	Gallus gallus	35.50	6.00e-56	209.00
IUUC-Gac-041978	Gasterosteus aculeatus	33.33	3.00e-47	181.00
IUUC-Gma-043371	Glycine max	38.58	5.00e-63	233.00
IUUC-Hsa-046001	Homo sapiens	34.05	1.00e-52	198.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	34.05	7.00e-53	199.00
IUUC-Kpa-049235	Komagataella pastoris	41.84	2.00e-90	324.00
IUUC-Lch-049926	Latimeria chalumnae	34.69	4.00e-52	196.00
IUUC-Lpe-051352	Leersia perrieri	39.80	2.00e-58	218.00
IUUC-Loc-051987	Lepisosteus oculatus	34.59	1.00e-54	205.00
IUUC-Lma-053171	Leptosphaeria maculans	78.07	0.00e+00	654.00
IUUC-Laf-054372	Loxodonta africana	34.32	3.00e-55	207.00
IUUC-Mcc-055108	Macaca mulatta	34.32	3.00e-53	200.00
IUUC-Mor-056990	Magnaporthe oryzae	45.82	4.00e-98	350.00
IUUC-Mtr-058401	Medicago truncatula	39.05	7.00e-63	232.00
IUUC-Mla-059186	Melampsora laricipopulina	43.17	1.00e-75	275.00
IUUC-Mvi-060262	Microbotryum violaceum	42.43	7.00e-72	263.00
IUUC-Mmr-061688	Microcebus murinus	31.62	6.00e-48	182.00
IUUC-Mdo-062154	Monodelphis domestica	34.49	2.00e-52	197.00
IUUC-Mmu-064232	Mus musculus	34.50	3.00e-53	200.00
IUUC-Mac-065091	Musa acuminata	39.37	2.00e-58	217.00
IUUC-Mpu-066747	Mustela putorius furo	31.47	3.00e-41	160.00
IUUC-Mlu-067799	Myotis lucifugus	30.79	4.00e-42	163.00
IUUC-Nfi-068371	Neosartorya fischeri	57.45	4.00e-29	118.00
IUUC-Ncr-068704	Neurospora crassa	44.62	3.00e-101	360.00
IUUC-Nle-069054	Nomascus leucogenys	34.32	5.00e-53	199.00
IUUC-Ont-071624	Oreochromis niloticus	32.16	3.00e-48	183.00
IUUC-Oan-072898	Ornithorhynchus anatinus	34.32	2.00e-52	197.00
IUUC-Ocu-074289	Oryctolagus cuniculus	32.32	1.00e-41	161.00
IUUC-Oba-075985	Oryza barthii	39.46	2.00e-57	214.00
IUUC-Obr-076887	Oryza brachyantha	38.56	1.00e-60	225.00
IUUC-Ogl-077823	Oryza glaberrima	39.46	2.00e-57	214.00
IUUC-Ogu-078412	Oryza glumaepatula	39.59	9.00e-58	216.00
IUUC-Oin-079569	Oryza indica	36.15	6.00e-45	173.00
IUUC-Olo-080249	Oryza longistaminata	34.30	1.00e-43	169.00
IUUC-Ome-081240	Oryza meridionalis	39.12	2.00e-57	214.00
IUUC-Oni-082152	Oryza nivara	39.12	2.00e-57	214.00
IUUC-Opu-084011	Oryza punctata	39.12	6.00e-57	213.00
IUUC-Oru-084719	Oryza rufipogon	39.18	2.00e-61	228.00
IUUC-Osa-085286	Oryza sativa	39.93	1.00e-58	218.00
IUUC-Ola-086525	Oryzias latipes	31.45	2.00e-39	154.00
IUUC-Olu-087876	Ostreococcus lucimarinus	34.63	2.00e-41	161.00
IUUC-Oga-088125	Otolemur garnettii	34.05	2.00e-55	207.00
IUUC-Oar-089701	Ovis aries	33.24	5.00e-54	202.00
IUUC-Ptr-091218	Pan troglodytes	34.59	2.00e-53	201.00
IUUC-Pan-091755	Papio anubis	34.32	3.00e-53	200.00
IUUC-Psi-094061	Pelodiscus sinensis	35.50	2.00e-54	204.00
IUUC-Pma-094430	Petromyzon marinus	34.15	1.00e-39	154.00
IUUC-Pno-094900	Phaeosphaeria nodorum	63.78	2.00e-136	478.00
IUUC-Ppa-095895	Physcomitrella patens	40.88	3.00e-70	257.00
IUUC-Pfo-096297	Poecilia formosa	34.15	5.00e-39	152.00
IUUC-Pab-097717	Pongo abelii	34.32	3.00e-53	200.00
IUUC-Pop-098938	Populus trichocarpa	38.20	2.00e-60	224.00
IUUC-Pca-100389	Procavia capensis	35.69	7.00e-48	182.00
IUUC-Ppe-102045	Prunus persica	39.56	2.00e-59	221.00
IUUC-Pva-102357	Pteropus vampyrus	37.14	2.00e-21	93.60
IUUC-Pgr-103399	Puccinia graminis	42.45	1.00e-75	275.00
IUUC-Ptt-103872	Puccinia triticina	42.04	6.00e-78	283.00
IUUC-Pte-104092	Pyrenophora teres	95.45	0.00e+00	814.00
IUUC-Rno-105515	Rattus norvegicus	34.23	3.00e-55	207.00
IUUC-Sce-106434	Saccharomyces cerevisiae	47.32	2.00e-90	324.00
IUUC-Sha-106808	Sarcophilus harrisii	33.96	2.00e-51	194.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	43.60	4.00e-86	309.00
IUUC-Spo-108044	Schizosaccharomyces pombe	48.50	8.00e-95	338.00
IUUC-Smo-109581	Selaginella moellendorffii	40.84	5.00e-62	229.00
IUUC-Sit-110704	Setaria italica	38.17	3.00e-59	220.00
IUUC-Sly-110990	Solanum lycopersicum	40.36	2.00e-54	203.00
IUUC-Stu-112542	Solanum tuberosum	34.25	4.00e-31	126.00
IUUC-Sar-113766	Sorex araneus	35.03	2.00e-48	184.00
IUUC-Sbi-114016	Sorghum bicolor	37.54	6.00e-58	216.00
IUUC-Sre-115099	Sporisorium reilianum	39.03	5.00e-78	283.00
IUUC-Ssc-115277	Sus scrofa	34.05	1.00e-52	198.00
IUUC-Tgu-117343	Taeniopygia guttata	37.66	3.00e-55	207.00
IUUC-Tru-118397	Takifugu rubripes	31.96	4.00e-50	190.00
IUUC-Tni-120272	Tetraodon nigroviridis	31.88	2.00e-50	191.00
IUUC-Tca-121514	Theobroma cacao	39.62	4.00e-65	239.00
IUUC-Tre-121990	Trichoderma reesei	53.40	3.00e-102	363.00
IUUC-Tvi-122504	Trichoderma virens	53.35	1.00e-99	354.00
IUUC-Tae-123153	Triticum aestivum	38.02	5.00e-59	219.00
IUUC-Tur-126693	Triticum urartu	39.19	4.00e-54	202.00
IUUC-Tme-127011	Tuber melanosporum	50.35	5.00e-113	399.00
IUUC-Tbe-127939	Tupaia belangeri	34.05	3.00e-52	197.00
IUUC-Ttr-128889	Tursiops truncatus	32.32	2.00e-40	157.00
IUUC-Uma-129450	Ustilago maydis	38.29	6.00e-77	279.00
IUUC-Vda-129919	Verticillium dahliae	51.69	3.00e-90	323.00
IUUC-Vvi-130928	Vitis vinifera	38.32	5.00e-60	223.00
IUUC-Xtr-131891	Xenopus tropicalis	33.33	7.00e-50	189.00
IUUC-Xma-133260	Xiphophorus maculatus	34.55	3.00e-39	153.00
IUUC-Yli-134578	Yarrowia lipolytica	44.47	5.00e-87	313.00
IUUC-Zma-135427	Zea mays	37.54	4.00e-57	213.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence