iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135427

Ensembl Protein ID

Zm00001d003076_T001

UniProt Accession

B4G0C7; B4G0C7_MAIZE

Genbank Protein ID

ACF87820.1; ONM15996.1

Protein Name

General transcription factor IIH subunit 2

Genbank Nucleotide ID

BT042815; CM007648

Gene Name

ZEAMMB73_Zm00001d003076

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d003076	Zm00001d003076_T002	Zm00001d003076_T002
Zm00001d003076	Zm00001d003076_T001	Zm00001d003076_T001

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	41.75	3.00e-78	287.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Zea mays

Protein Sequence
(Fasta)

MYGVGGGFNA PSTAASRRRN PGDEEEDEED EGGEGRVLEA WERAYADERS WESLQEDESG 60
LLRPVDTKTL VHAQYRRRLL LRSAAAAAAR IQKGLIRYLY IVIDLSRAAS EMDYRPSRMA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGGCACCA AGCACCCGCC TGGCCCATGT GCTGGTCCCC GAATCCCGAC CTCGCCTCCA 60
GTTCCACTCT TCCGGCGGCG TCGGCGGCCG CCCCTTCCCC ACGCCCACAC CATGTACGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A
IPR013087--Znf_C2H2_type

PROSITE

PS50234--VWFA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4
SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005675--C:holo TFIIH complex
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

KEGG

zma:100274342

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	89.72	3.00e-141	493.00
IUUC-Aml-002041	Ailuropoda melanoleuca	41.33	4.00e-75	274.00
IUUC-Atr-003056	Amborella trichopoda	71.92	2.00e-137	481.00
IUUC-Apl-003464	Anas platyrhynchos	41.16	2.00e-69	255.00
IUUC-Aca-004745	Anolis carolinensis	41.88	6.00e-74	270.00
IUUC-Aly-005559	Arabidopsis lyrata	73.63	2.00e-154	538.00
IUUC-Ath-007556	Arabidopsis thaliana	73.63	3.00e-154	537.00
IUUC-Ago-007851	Ashbya gossypii	42.68	4.00e-82	298.00
IUUC-Acl-008100	Aspergillus clavatus	38.71	1.00e-76	279.00
IUUC-Afl-008649	Aspergillus flavus	36.23	4.00e-11	58.50
IUUC-Afu-009066	Aspergillus fumigatus	37.47	2.00e-77	281.00
IUUC-Ani-009372	Aspergillus nidulans	38.64	1.00e-76	279.00
IUUC-Ang-009726	Aspergillus niger	36.92	7.00e-81	293.00
IUUC-Aor-010135	Aspergillus oryzae	38.37	8.00e-78	283.00
IUUC-Ate-010399	Aspergillus terreus	32.69	3.00e-18	84.30
IUUC-Ame-011618	Astyanax mexicanus	41.62	7.00e-84	303.00
IUUC-Bgr-012154	Blumeria graminis	36.39	7.00e-72	263.00
IUUC-Bta-012353	Bos taurus	41.33	5.00e-79	287.00
IUUC-Bci-013932	Botrytis cinerea	40.68	5.00e-78	284.00
IUUC-Bdi-014391	Brachypodium distachyon	88.36	0.00e+00	670.00
IUUC-Bol-015128	Brassica oleracea	73.64	5.00e-157	546.00
IUUC-Bra-017932	Brassica rapa	73.77	4.00e-157	546.00
IUUC-Cel-018649	Caenorhabditis elegans	38.70	3.00e-65	241.00
IUUC-Cja-018776	Callithrix jacchus	40.82	1.00e-74	272.00
IUUC-Cfa-020584	Canis familiaris	41.33	6.00e-76	277.00
IUUC-Cpo-021300	Cavia porcellus	41.33	3.00e-75	275.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	49.35	1.00e-93	335.00
IUUC-Csa-024092	Chlorocebus sabaeus	41.07	8.00e-75	273.00
IUUC-Cho-024919	Choloepus hoffmanni	42.13	3.00e-35	140.00
IUUC-Cin-025386	Ciona intestinalis	40.05	3.00e-79	288.00
IUUC-Csv-026295	Ciona savignyi	39.55	3.00e-76	278.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	36.77	5.00e-72	264.00
IUUC-Cne-026956	Cryptococcus neoformans	36.73	1.00e-73	270.00
IUUC-Cme-027150	Cyanidioschyzon merolae	34.71	2.00e-51	196.00
IUUC-Dre-027962	Danio rerio	42.09	4.00e-85	307.00
IUUC-Dno-029979	Dasypus novemcinctus	40.64	7.00e-67	246.00
IUUC-Dse-031405	Dothistroma septosporum	41.96	7.00e-77	280.00
IUUC-Dme-031710	Drosophila melanogaster	38.40	6.00e-79	287.00
IUUC-Ete-032631	Echinops telfairi	38.52	1.00e-67	249.00
IUUC-Eca-034054	Equus caballus	41.98	6.00e-76	277.00
IUUC-Fca-035724	Felis catus	39.29	6.00e-71	260.00
IUUC-Fal-036987	Ficedula albicollis	41.33	1.00e-83	302.00
IUUC-Fox-037692	Fusarium oxysporum	39.47	2.00e-80	292.00
IUUC-Fso-038442	Fusarium solani	40.44	3.00e-80	291.00
IUUC-Gmo-039273	Gadus morhua	42.53	2.00e-84	305.00
IUUC-Ggr-040009	Gaeumannomyces graminis	40.80	2.00e-62	232.00
IUUC-Gga-041089	Gallus gallus	40.82	3.00e-83	301.00
IUUC-Gac-041978	Gasterosteus aculeatus	40.82	2.00e-78	285.00
IUUC-Gma-043371	Glycine max	76.42	3.00e-173	600.00
IUUC-Hsa-046001	Homo sapiens	41.07	3.00e-74	271.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	41.58	4.00e-82	298.00
IUUC-Kpa-049235	Komagataella pastoris	41.38	2.00e-77	282.00
IUUC-Lch-049926	Latimeria chalumnae	41.62	1.00e-78	286.00
IUUC-Lpe-051352	Leersia perrieri	88.89	0.00e+00	653.00
IUUC-Loc-051987	Lepisosteus oculatus	41.33	7.00e-83	300.00
IUUC-Lma-053171	Leptosphaeria maculans	31.83	6.00e-66	244.00
IUUC-Laf-054372	Loxodonta africana	41.33	8.00e-79	286.00
IUUC-Mcc-055108	Macaca mulatta	41.07	1.00e-74	273.00
IUUC-Mor-056990	Magnaporthe oryzae	36.61	5.00e-75	274.00
IUUC-Mtr-058401	Medicago truncatula	73.98	2.00e-168	585.00
IUUC-Mla-059186	Melampsora laricipopulina	40.20	9.00e-83	300.00
IUUC-Mvi-060262	Microbotryum violaceum	39.45	3.00e-80	291.00
IUUC-Mmr-061688	Microcebus murinus	37.40	4.00e-62	231.00
IUUC-Mdo-062154	Monodelphis domestica	41.22	2.00e-78	285.00
IUUC-Mmu-064232	Mus musculus	40.46	3.00e-73	268.00
IUUC-Mac-065091	Musa acuminata	80.15	1.00e-166	578.00
IUUC-Mpu-066747	Mustela putorius furo	38.29	6.00e-62	230.00
IUUC-Mlu-067799	Myotis lucifugus	38.62	3.00e-66	244.00
IUUC-Nfi-068371	Neosartorya fischeri	37.50	2.00e-13	67.40
IUUC-Ncr-068704	Neurospora crassa	38.77	1.00e-78	286.00
IUUC-Nle-069054	Nomascus leucogenys	40.82	4.00e-74	271.00
IUUC-Ont-071624	Oreochromis niloticus	42.86	3.00e-85	308.00
IUUC-Oan-072898	Ornithorhynchus anatinus	40.86	2.00e-78	285.00
IUUC-Ocu-074289	Oryctolagus cuniculus	39.48	1.00e-57	216.00
IUUC-Oba-075985	Oryza barthii	90.74	0.00e+00	654.00
IUUC-Obr-076887	Oryza brachyantha	89.52	0.00e+00	677.00
IUUC-Ogl-077823	Oryza glaberrima	90.74	0.00e+00	654.00
IUUC-Ogu-078412	Oryza glumaepatula	91.16	1.00e-168	585.00
IUUC-Oin-079569	Oryza indica	89.78	4.00e-143	500.00
IUUC-Olo-080249	Oryza longistaminata	91.59	2.00e-143	501.00
IUUC-Ome-081240	Oryza meridionalis	91.16	1.00e-168	585.00
IUUC-Oni-082152	Oryza nivara	91.16	7.00e-168	582.00
IUUC-Opu-084011	Oryza punctata	90.95	0.00e+00	659.00
IUUC-Oru-084719	Oryza rufipogon	89.74	4.00e-174	603.00
IUUC-Osa-085286	Oryza sativa	90.00	0.00e+00	658.00
IUUC-Ola-086525	Oryzias latipes	40.46	9.00e-68	249.00
IUUC-Olu-087876	Ostreococcus lucimarinus	45.55	2.00e-85	308.00
IUUC-Oga-088125	Otolemur garnettii	40.97	9.00e-77	280.00
IUUC-Oar-089701	Ovis aries	41.33	1.00e-78	286.00
IUUC-Ptr-091218	Pan troglodytes	40.82	2.00e-74	272.00
IUUC-Pan-091755	Papio anubis	41.07	1.00e-74	273.00
IUUC-Psi-094061	Pelodiscus sinensis	41.48	4.00e-80	291.00
IUUC-Pma-094430	Petromyzon marinus	41.67	2.00e-53	201.00
IUUC-Pno-094900	Phaeosphaeria nodorum	31.54	2.00e-43	169.00
IUUC-Ppa-095895	Physcomitrella patens	61.22	6.00e-144	503.00
IUUC-Pfo-096297	Poecilia formosa	43.65	7.00e-55	206.00
IUUC-Pab-097717	Pongo abelii	41.07	1.00e-74	273.00
IUUC-Pop-098938	Populus trichocarpa	77.00	4.00e-162	563.00
IUUC-Pca-100389	Procavia capensis	39.77	3.00e-61	228.00
IUUC-Ppe-102045	Prunus persica	76.23	9.00e-161	559.00
IUUC-Pva-102357	Pteropus vampyrus	47.09	5.00e-38	150.00
IUUC-Pgr-103399	Puccinia graminis	40.24	1.00e-81	296.00
IUUC-Ptt-103872	Puccinia triticina	40.19	2.00e-81	295.00
IUUC-Pte-104092	Pyrenophora teres	37.85	2.00e-61	229.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	38.17	1.00e-61	229.00
IUUC-Rno-105515	Rattus norvegicus	41.48	7.00e-78	283.00
IUUC-Sce-106434	Saccharomyces cerevisiae	41.75	4.00e-83	301.00
IUUC-Sha-106808	Sarcophilus harrisii	40.71	6.00e-77	280.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	39.95	2.00e-74	272.00
IUUC-Spo-108044	Schizosaccharomyces pombe	40.71	5.00e-85	307.00
IUUC-Smo-109581	Selaginella moellendorffii	57.47	2.00e-128	451.00
IUUC-Sit-110704	Setaria italica	92.40	0.00e+00	699.00
IUUC-Sly-110990	Solanum lycopersicum	71.75	1.00e-127	448.00
IUUC-Stu-112542	Solanum tuberosum	74.77	2.00e-90	324.00
IUUC-Sar-113766	Sorex araneus	40.67	1.00e-62	233.00
IUUC-Sbi-114016	Sorghum bicolor	96.43	0.00e+00	727.00
IUUC-Sre-115099	Sporisorium reilianum	36.94	1.00e-76	280.00
IUUC-Ssc-115277	Sus scrofa	41.22	1.00e-72	266.00
IUUC-Tgu-117343	Taeniopygia guttata	41.07	3.00e-83	301.00
IUUC-Tru-118397	Takifugu rubripes	41.31	7.00e-79	286.00
IUUC-Tni-120272	Tetraodon nigroviridis	41.31	7.00e-78	283.00
IUUC-Tca-121514	Theobroma cacao	78.06	9.00e-175	605.00
IUUC-Tre-121990	Trichoderma reesei	39.08	3.00e-77	281.00
IUUC-Tvi-122504	Trichoderma virens	41.55	9.00e-76	276.00
IUUC-Tae-123153	Triticum aestivum	88.76	0.00e+00	662.00
IUUC-Tur-126693	Triticum urartu	94.00	7.00e-140	489.00
IUUC-Tme-127011	Tuber melanosporum	39.80	2.00e-79	289.00
IUUC-Tbe-127939	Tupaia belangeri	40.97	9.00e-74	270.00
IUUC-Ttr-128889	Tursiops truncatus	35.46	1.00e-62	233.00
IUUC-Uma-129450	Ustilago maydis	36.64	1.00e-75	276.00
IUUC-Vda-129919	Verticillium dahliae	38.97	6.00e-69	254.00
IUUC-Vvi-130928	Vitis vinifera	79.33	1.00e-168	585.00
IUUC-Xtr-131891	Xenopus tropicalis	36.41	8.00e-68	250.00
IUUC-Xma-133260	Xiphophorus maculatus	42.86	4.00e-54	203.00
IUUC-Yli-134578	Yarrowia lipolytica	42.04	1.00e-78	286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence