iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014279

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000884

Gene Name

LOC100838251; BRADI_5g19180

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI5G19180	BRADI5G19180.1	BRADI5G19180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.70e-09	36.7	114	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ +   ++  ++++C H+fh+ Cl +w     ++  + +CPlCr
   Q: 114  CAVCLSGIgggDEVRRLTNCRHAFHRACLDRW-----MEHDQRTCPLCR 157
           ******9999655345788*************.....799********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGFPVGYSEL LLPKQLLHLL LLLGCIRRFL LWAFDAVGLG DLLDLGDDHN VLPPPHHHHD 60
HEQHQQAVAA PAQQSAHLRA ELLFRPVSAL VIEEVLPVVR YDELAPAQCG GGDCAVCLSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCACCACA CCATCCCCCA GCCCAGCTCC GGTTGAGGAC CCCGGGAGGA CACACACACC 60
ACCAATCTGG ACCAACGTTT TGGCAAAGGG ATACGCAACA CAGCAGCAGC AGTATAGCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100838251

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002812	Amborella trichopoda	54.55	1.00e-27	114.00
IUUC-Bra-016739	Brassica rapa	53.54	1.00e-27	115.00
IUUC-Hvu-047847	Hordeum vulgare	71.71	3.00e-47	180.00
IUUC-Lpe-050715	Leersia perrieri	80.60	1.00e-52	198.00
IUUC-Oba-075031	Oryza barthii	58.87	4.00e-34	135.00
IUUC-Obr-076564	Oryza brachyantha	82.03	4.00e-52	195.00
IUUC-Ogl-077699	Oryza glaberrima	80.29	1.00e-49	188.00
IUUC-Ogu-078689	Oryza glumaepatula	81.02	5.00e-50	189.00
IUUC-Oin-079149	Oryza indica	80.29	1.00e-49	188.00
IUUC-Ome-081370	Oryza meridionalis	81.02	5.00e-50	189.00
IUUC-Oni-082967	Oryza nivara	80.29	1.00e-49	188.00
IUUC-Opu-083259	Oryza punctata	75.69	8.00e-51	192.00
IUUC-Oru-084405	Oryza rufipogon	81.02	5.00e-50	189.00
IUUC-Osa-085893	Oryza sativa	80.29	2.00e-49	187.00
IUUC-Pop-099117	Populus trichocarpa	47.12	4.00e-24	103.00
IUUC-Ppe-102039	Prunus persica	57.14	2.00e-25	107.00
IUUC-Sbi-114509	Sorghum bicolor	81.20	3.00e-48	183.00
IUUC-Tca-121864	Theobroma cacao	55.79	1.00e-27	114.00
IUUC-Tae-122742	Triticum aestivum	74.07	4.00e-55	206.00
IUUC-Vvi-130886	Vitis vinifera	54.46	4.00e-28	116.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence