iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111667

Ensembl Protein ID

Solyc07g062780.2.1

UniProt Accession

K4CGW1; K4CGW1_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc07g062780.2	Solyc07g062780.2.1	Solyc07g062780.2.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	53.75	6.00e-71	264.00	IUUC-Ath-007424
E3 activity/RING/RING	31.34	6.00e-05	42.70	IUUC-Sce-106198

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MASTSGAGSG VAAGRIRSHT SALYSDSQSL ILEIRKSVTM MKDIAVHLER DERTQMVKDL 60
EDGVVQLLAA SDECMHLSEA IQSIGDTLEP GPEPTNFKKK FDEEIAKSKA RSSSHTQNQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGAAGAAGA AAAAAAGGGA ACAAATAAAA GCTACTGTTT GAGTTCAAAC GACGCCGTAA 60
AATACTCAGA ATGGCGTCGA CGTCCGGCGC AGGCAGCGGC GTAGCTGCCG GAAGGATCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR026846--Nse2(Mms21)
IPR004181--Znf_MIZ
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF11789--zf-Nse

Gene Ontology

GO:0005634--C:nucleus
GO:0030915--C:Smc5-Smc6 complex
GO:0019789--F:SUMO transferase activity
GO:0008270--F:zinc ion binding
GO:0000724--P:double-strand break repair via homologous recombination
GO:0060250--P:germ-line stem-cell niche homeostasis
GO:0032876--P:negative regulation of DNA endoreduplication
GO:0008284--P:positive regulation of cell proliferation
GO:0080038--P:positive regulation of cytokinin-activated signaling pathway
GO:0045931--P:positive regulation of mitotic cell cycle
GO:0010082--P:regulation of root meristem growth

KEGG

sly:101262030

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000276	Aegilops tauschii	47.40	6.00e-54	202.00
IUUC-Atr-002438	Amborella trichopoda	52.36	5.00e-63	233.00
IUUC-Apl-004091	Anas platyrhynchos	33.33	1.00e-03	34.30
IUUC-Aca-004433	Anolis carolinensis	25.60	3.00e-08	51.20
IUUC-Aly-006133	Arabidopsis lyrata	53.82	2.00e-75	274.00
IUUC-Ath-007424	Arabidopsis thaliana	53.20	1.00e-74	271.00
IUUC-Ago-007852	Ashbya gossypii	22.32	1.00e-03	35.40
IUUC-Ame-010902	Astyanax mexicanus	34.78	6.00e-09	53.50
IUUC-Bgr-012088	Blumeria graminis	27.96	2.00e-04	39.70
IUUC-Bta-013397	Bos taurus	30.00	3.00e-03	34.30
IUUC-Bci-013738	Botrytis cinerea	22.03	3.00e-03	35.40
IUUC-Bdi-014403	Brachypodium distachyon	44.49	7.00e-57	213.00
IUUC-Bol-015454	Brassica oleracea	53.75	2.00e-75	274.00
IUUC-Bra-017093	Brassica rapa	43.93	7.00e-63	233.00
IUUC-Cel-018588	Caenorhabditis elegans	33.33	3.00e-04	37.40
IUUC-Cpo-021670	Cavia porcellus	30.00	4.00e-03	34.30
IUUC-Cgl-026430	Colletotrichum gloeosporioides	38.18	3.00e-06	45.80
IUUC-Cme-027175	Cyanidioschyzon merolae	31.67	3.00e-05	41.60
IUUC-Dre-028325	Danio rerio	30.77	1.00e-07	48.90
IUUC-Dno-029735	Dasypus novemcinctus	23.64	1.00e-05	42.70
IUUC-Dse-031273	Dothistroma septosporum	33.77	4.00e-07	48.50
IUUC-Dme-031933	Drosophila melanogaster	26.94	9.00e-10	56.20
IUUC-Ete-032838	Echinops telfairi	34.04	3.00e-03	33.90
IUUC-Eca-034371	Equus caballus	24.58	5.00e-07	47.40
IUUC-Eeu-035258	Erinaceus europaeus	28.57	4.00e-03	33.90
IUUC-Fal-037038	Ficedula albicollis	33.33	2.00e-06	44.70
IUUC-Fox-037843	Fusarium oxysporum	33.96	5.00e-05	41.20
IUUC-Ggr-040059	Gaeumannomyces graminis	23.29	2.00e-04	39.70
IUUC-Gga-040737	Gallus gallus	34.09	6.50e-02	30.40
IUUC-Gac-042591	Gasterosteus aculeatus	39.13	2.00e-07	48.50
IUUC-Gma-043177	Glycine max	52.32	4.00e-73	266.00
IUUC-Hvu-047252	Hordeum vulgare	47.80	3.00e-58	217.00
IUUC-Itr-048972	Ictidomys tridecemlineatus	30.00	2.00e-03	33.50
IUUC-Lpe-051150	Leersia perrieri	44.84	2.00e-60	224.00
IUUC-Loc-052687	Lepisosteus oculatus	31.25	9.00e-06	43.10
IUUC-Lma-053255	Leptosphaeria maculans	24.49	9.00e-05	41.20
IUUC-Laf-054270	Loxodonta africana	22.30	3.00e-03	34.70
IUUC-Mor-057028	Magnaporthe oryzae	27.50	6.00e-04	37.70
IUUC-Mpo-057462	Magnaporthe poae	25.35	5.00e-05	41.60
IUUC-Mtr-058011	Medicago truncatula	48.81	5.00e-71	259.00
IUUC-Mla-059014	Melampsora laricipopulina	24.09	3.00e-03	35.40
IUUC-Mvi-060511	Microbotryum violaceum	29.41	7.00e-06	44.30
IUUC-Mmr-061584	Microcebus murinus	30.00	3.00e-03	34.70
IUUC-Mdo-061863	Monodelphis domestica	29.47	4.00e-06	43.90
IUUC-Mac-065639	Musa acuminata	52.99	5.00e-62	229.00
IUUC-Mpu-066092	Mustela putorius furo	28.28	2.00e-05	42.40
IUUC-Mlu-068198	Myotis lucifugus	23.78	8.00e-06	43.10
IUUC-Ncr-068773	Neurospora crassa	26.92	3.00e-06	45.40
IUUC-Opr-070540	Ochotona princeps	29.09	3.00e-03	34.30
IUUC-Ont-071575	Oreochromis niloticus	30.70	1.00e-09	55.80
IUUC-Oba-075725	Oryza barthii	48.28	4.00e-55	206.00
IUUC-Obr-076506	Oryza brachyantha	53.41	3.00e-56	210.00
IUUC-Ogl-077564	Oryza glaberrima	49.36	1.00e-42	164.00
IUUC-Ogu-079018	Oryza glumaepatula	47.78	2.00e-54	204.00
IUUC-Oin-079792	Oryza indica	49.25	7.00e-57	212.00
IUUC-Olo-080864	Oryza longistaminata	32.35	1.00e-13	67.40
IUUC-Ome-081426	Oryza meridionalis	49.75	6.00e-57	213.00
IUUC-Oni-082286	Oryza nivara	48.28	3.00e-55	207.00
IUUC-Opu-083586	Oryza punctata	48.74	3.00e-55	207.00
IUUC-Oru-085158	Oryza rufipogon	48.28	3.00e-55	207.00
IUUC-Osa-085872	Oryza sativa	36.36	8.00e-09	51.60
IUUC-Olu-087903	Ostreococcus lucimarinus	40.00	8.00e-04	36.60
IUUC-Oga-087925	Otolemur garnettii	30.00	4.00e-03	34.30
IUUC-Oar-090138	Ovis aries	30.00	3.00e-03	34.70
IUUC-Psi-093714	Pelodiscus sinensis	30.43	3.00e-05	41.60
IUUC-Pma-094198	Petromyzon marinus	32.00	4.00e-10	56.20
IUUC-Pno-094931	Phaeosphaeria nodorum	30.77	3.00e-06	45.80
IUUC-Ppa-095570	Physcomitrella patens	36.65	7.00e-45	173.00
IUUC-Pop-099559	Populus trichocarpa	53.53	7.00e-75	273.00
IUUC-Pca-100368	Procavia capensis	30.00	4.00e-03	34.30
IUUC-Ppe-101873	Prunus persica	58.33	1.00e-82	298.00
IUUC-Pva-102951	Pteropus vampyrus	24.54	6.00e-06	43.50
IUUC-Pte-104390	Pyrenophora teres	24.31	5.00e-06	44.70
IUUC-Pyt-104633	Pyrenophora triticirepentis	25.53	2.00e-05	42.70
IUUC-Rno-105346	Rattus norvegicus	24.48	1.00e-03	35.80
IUUC-Sce-106198	Saccharomyces cerevisiae	31.34	1.00e-05	42.70
IUUC-Sha-107586	Sarcophilus harrisii	33.33	7.00e-03	32.70
IUUC-Sja-107983	Schizosaccharomyces japonicus	26.98	7.00e-08	50.10
IUUC-Spo-108327	Schizosaccharomyces pombe	23.28	1.00e-06	46.20
IUUC-Ssl-108555	Sclerotinia sclerotiorum	23.73	3.00e-04	39.30
IUUC-Smo-109438	Selaginella moellendorffii	37.68	9.00e-34	135.00
IUUC-Sit-109919	Setaria italica	48.62	2.00e-65	241.00
IUUC-Stu-112211	Solanum tuberosum	97.10	7.00e-139	485.00
IUUC-Sbi-113916	Sorghum bicolor	48.18	2.00e-65	241.00
IUUC-Tgu-116472	Taeniopygia guttata	31.88	8.00e-05	39.70
IUUC-Tru-117771	Takifugu rubripes	38.03	4.00e-07	47.80
IUUC-Tni-119821	Tetraodon nigroviridis	42.25	3.00e-08	51.20
IUUC-Tca-121272	Theobroma cacao	56.10	2.00e-79	288.00
IUUC-Tre-122049	Trichoderma reesei	32.67	1.00e-06	46.60
IUUC-Tvi-122642	Trichoderma virens	30.16	4.00e-06	45.10
IUUC-Tae-122969	Triticum aestivum	46.85	5.00e-61	226.00
IUUC-Tur-126346	Triticum urartu	46.88	5.00e-53	199.00
IUUC-Tme-126988	Tuber melanosporum	25.40	2.00e-07	48.90
IUUC-Tbe-127676	Tupaia belangeri	33.93	1.00e-03	35.40
IUUC-Ttr-128602	Tursiops truncatus	30.30	4.00e-05	40.80
IUUC-Vvi-131486	Vitis vinifera	64.59	3.00e-80	290.00
IUUC-Yli-134676	Yarrowia lipolytica	34.44	5.00e-08	51.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence