iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__3167__AT2G20030.1	fgenesh2_kg.3__3167__AT2G20030.1	fgenesh2_kg.3__3167__AT2G20030.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-08	35.1	129	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp....CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f+d + +l+    C H+fh  C+ +w        ++++CPlCr
   Q: 129  CSVCLSKFED-VEILRllpkCRHAFHIGCIDQW------LEQHATCPLCR 171
           ********99.55555555**************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNSPQEISIL FFFFFIIIFL DYVSAQSPPP PPPDIYATSD LFKPSLAIIT GVFSIVFTLT 60
FVLLVYAKCF HNDLRSETDG DGETRRHDRL WQGLFNRSSR FSGLDKKAIE SLPFFRFAAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATTCAC CACAAGAAAT CTCCATTCTC TTCTTCTTCT TCTTCATCAT CATCTTCTTA 60
GACTATGTCT CTGCTCAATC TCCTCCTCCT CCTCCTCCTG ATATATACGC AACAAGCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_480466

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006742	Arabidopsis thaliana	91.21	0.00e+00	644.00
IUUC-Bol-016280	Brassica oleracea	72.02	5.00e-148	516.00
IUUC-Hvu-047489	Hordeum vulgare	35.98	8.00e-47	180.00
IUUC-Lpe-051018	Leersia perrieri	35.37	3.00e-44	171.00
IUUC-Mac-064701	Musa acuminata	40.62	1.00e-64	239.00
IUUC-Oba-075667	Oryza barthii	34.93	5.00e-45	174.00
IUUC-Ogl-077500	Oryza glaberrima	34.93	5.00e-45	174.00
IUUC-Ogu-078252	Oryza glumaepatula	41.32	5.00e-41	160.00
IUUC-Ome-081414	Oryza meridionalis	34.38	3.00e-42	164.00
IUUC-Oni-082687	Oryza nivara	34.93	5.00e-45	174.00
IUUC-Opu-084088	Oryza punctata	37.47	5.00e-52	197.00
IUUC-Oru-084787	Oryza rufipogon	34.84	6.00e-46	177.00
IUUC-Osa-085704	Oryza sativa	34.93	5.00e-45	174.00
IUUC-Sha-107305	Sarcophilus harrisii	31.45	2.00e-14	72.00
IUUC-Sit-110634	Setaria italica	35.73	6.00e-53	200.00
IUUC-Sly-111674	Solanum lycopersicum	46.59	2.00e-80	291.00
IUUC-Stu-111967	Solanum tuberosum	49.47	8.00e-84	303.00
IUUC-Sbi-114371	Sorghum bicolor	37.59	4.00e-39	155.00
IUUC-Tae-125327	Triticum aestivum	33.77	7.00e-45	173.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence