iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075907

Ensembl Protein ID

OBART06G28030.1

UniProt Accession

A0A0D3GL18; A0A0D3GL18_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART06G28030	OBART06G28030.1	OBART06G28030.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-23	84.1	263	328

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p +flCpIsle+M+dP       ty+r+sI+kwl+ g++tcP+t+qpl + +l Pn++l++li +wc++n++
   Q: 263  IPNDFLCPISLEIMTDP-------TYERRSIQKWLDAGQRTCPKTQQPLGHLSLAPNYALKNLIMQWCDKNKV 328
           799**************.......8*********************************************987 PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MLRMGAAVAE AEPSGRQLSD GDLLEELLST ANAARAFHEF RQSQRKECFN LLRWLQLLLP 60
LVQELRESAP ALSDDAYRRL ALLGRAFQAA RRLLRCCHDG SKIYLTLESE AVMGRFRGVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGCGGA TGGGCGCGGC GGTGGCGGAG GCGGAGCCGT CGGGGCGGCA GCTGTCCGAC 60
GGCGACCTGC TTGAGGAGCT CCTGTCGACG GCGAACGCAG CGCGCGCGTT CCACGAGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000563	Aegilops tauschii	76.03	0.00e+00	902.00
IUUC-Bdi-014836	Brachypodium distachyon	78.26	0.00e+00	956.00
IUUC-Fso-038217	Fusarium solani	30.81	7.00e-16	78.20
IUUC-Lpe-051074	Leersia perrieri	82.77	0.00e+00	948.00
IUUC-Obr-076853	Oryza brachyantha	87.57	0.00e+00	858.00
IUUC-Ogl-077690	Oryza glaberrima	100.00	0.00e+00	1161.00
IUUC-Ogu-078150	Oryza glumaepatula	100.00	0.00e+00	1161.00
IUUC-Oin-079405	Oryza indica	96.46	0.00e+00	1093.00
IUUC-Olo-081047	Oryza longistaminata	97.91	0.00e+00	1137.00
IUUC-Ome-081561	Oryza meridionalis	98.72	0.00e+00	1157.00
IUUC-Oni-082780	Oryza nivara	100.00	0.00e+00	1161.00
IUUC-Opu-083836	Oryza punctata	91.24	0.00e+00	1059.00
IUUC-Oru-084958	Oryza rufipogon	100.00	0.00e+00	1161.00
IUUC-Sit-110533	Setaria italica	77.18	0.00e+00	942.00
IUUC-Tae-125079	Triticum aestivum	76.60	0.00e+00	937.00
IUUC-Tur-126004	Triticum urartu	76.44	0.00e+00	828.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence