iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000016019.1	ENSSHAT00000019027.1	ENSSHAP00000018871.1
ENSSHAG00000016019.1	ENSSHAT00000019028.1	ENSSHAP00000018872.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/CUE	1.60e-06	28.2	190	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/CUE

   S: 1    dletaleqLkeiFP.nldysviqvvLeantgsleaavnnLLeg 42
           dl+t+++qL++i+P +l++++i++++e+ ++s++ +v  +L++
   Q: 190  DLTTKIMQLISIAPvTLQHDLITSLPEIIGDSQHGDVAGELSD 232
           79*******************************9888777766 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MFGKRRLSRS EDRRSLTDDY TTKKNEASKK PRKSIGQNEI VENDSTFVKL LKTAGVTLKT 60
GEKQNQLAVD QVIFQKKLSQ ALRKHSSYPK AVEEFIGGLE SYIEDRDCFR NCLLSCERLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTTGGGA AAAGAAGATT GTCAAGATCT GAAGACAGAA GGAGCCTGAC AGATGATTAC 60
ACCAGTGTGT GAAAAGTTAC TCACTTCGTT CAGGAAATAT TTAGAATGGG CTGCCACTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029448--FANCD2

Pfam

PF14631--FancD2

Gene Ontology

GO:0000793--C:condensed chromosome
GO:0005829--C:cytosol
GO:0016604--C:nuclear body
GO:0005730--C:nucleolus
GO:0048854--P:brain morphogenesis
GO:0034599--P:cellular response to oxidative stress
GO:0006281--P:DNA repair
GO:0007276--P:gamete generation
GO:0097150--P:neuronal stem cell population maintenance
GO:2000348--P:regulation of CD40 signaling pathway
GO:0050727--P:regulation of inflammatory response
GO:0045589--P:regulation of regulatory T cell differentiation
GO:0051090--P:regulation of sequence-specific DNA binding transcription factor activity
GO:0010332--P:response to gamma radiation
GO:0007129--P:synapsis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000432	Aegilops tauschii	28.60	1.00e-59	225.00
IUUC-Aml-001335	Ailuropoda melanoleuca	72.09	0.00e+00	1973.00
IUUC-Apl-004194	Anas platyrhynchos	55.96	0.00e+00	1484.00
IUUC-Aca-004342	Anolis carolinensis	58.22	0.00e+00	1591.00
IUUC-Aly-005786	Arabidopsis lyrata	27.38	4.00e-62	233.00
IUUC-Ath-007464	Arabidopsis thaliana	28.62	6.00e-77	283.00
IUUC-Ame-011928	Astyanax mexicanus	53.98	0.00e+00	713.00
IUUC-Bta-012694	Bos taurus	68.91	0.00e+00	1901.00
IUUC-Bdi-014978	Brachypodium distachyon	26.94	2.00e-62	234.00
IUUC-Cel-018414	Caenorhabditis elegans	23.79	6.00e-06	47.00
IUUC-Cja-018718	Callithrix jacchus	70.11	0.00e+00	1969.00
IUUC-Cfa-020099	Canis familiaris	71.73	0.00e+00	1961.00
IUUC-Cpo-022409	Cavia porcellus	66.27	0.00e+00	1776.00
IUUC-Csa-023529	Chlorocebus sabaeus	69.55	0.00e+00	1947.00
IUUC-Cho-024646	Choloepus hoffmanni	70.28	0.00e+00	751.00
IUUC-Cin-025320	Ciona intestinalis	25.90	1.00e-63	238.00
IUUC-Csv-025936	Ciona savignyi	36.07	8.00e-05	39.70
IUUC-Cgl-026482	Colletotrichum gloeosporioides	33.33	7.30e-02	33.50
IUUC-Cme-027121	Cyanidioschyzon merolae	36.30	2.00e-17	85.10
IUUC-Dre-027518	Danio rerio	54.43	0.00e+00	1391.00
IUUC-Dno-029719	Dasypus novemcinctus	71.28	0.00e+00	1950.00
IUUC-Dme-032205	Drosophila melanogaster	28.75	2.00e-28	122.00
IUUC-Ete-032735	Echinops telfairi	54.24	0.00e+00	928.00
IUUC-Eca-033657	Equus caballus	72.64	0.00e+00	1981.00
IUUC-Eeu-035133	Erinaceus europaeus	56.33	0.00e+00	1442.00
IUUC-Fca-035880	Felis catus	67.45	0.00e+00	1852.00
IUUC-Fal-037013	Ficedula albicollis	55.79	0.00e+00	1331.00
IUUC-Gmo-039371	Gadus morhua	49.12	0.00e+00	705.00
IUUC-Gga-040720	Gallus gallus	57.23	0.00e+00	1502.00
IUUC-Gac-042331	Gasterosteus aculeatus	52.75	0.00e+00	1322.00
IUUC-Ggo-045657	Gorilla gorilla	64.96	0.00e+00	1822.00
IUUC-Hsa-046759	Homo sapiens	70.43	0.00e+00	2006.00
IUUC-Hvu-047390	Hordeum vulgare	28.16	3.00e-61	230.00
IUUC-Itr-048885	Ictidomys tridecemlineatus	67.38	0.00e+00	1910.00
IUUC-Lch-049711	Latimeria chalumnae	58.77	0.00e+00	1541.00
IUUC-Lpe-050891	Leersia perrieri	27.49	5.00e-58	220.00
IUUC-Loc-051888	Lepisosteus oculatus	54.27	0.00e+00	1414.00
IUUC-Laf-053492	Loxodonta africana	73.45	0.00e+00	2023.00
IUUC-Mcc-055632	Macaca mulatta	68.21	0.00e+00	1925.00
IUUC-Mga-059769	Meleagris gallopavo	56.09	0.00e+00	1457.00
IUUC-Mmr-061234	Microcebus murinus	71.67	0.00e+00	2007.00
IUUC-Mdo-062903	Monodelphis domestica	86.68	0.00e+00	2438.00
IUUC-Mmu-063676	Mus musculus	63.91	0.00e+00	1684.00
IUUC-Mpu-066421	Mustela putorius furo	71.70	0.00e+00	1687.00
IUUC-Mlu-067851	Myotis lucifugus	68.33	0.00e+00	1894.00
IUUC-Nle-069694	Nomascus leucogenys	70.58	0.00e+00	948.00
IUUC-Opr-071174	Ochotona princeps	61.31	0.00e+00	991.00
IUUC-Ont-071414	Oreochromis niloticus	54.66	0.00e+00	1374.00
IUUC-Oan-072704	Ornithorhynchus anatinus	55.46	3.00e-83	301.00
IUUC-Ocu-073877	Oryctolagus cuniculus	68.58	0.00e+00	1894.00
IUUC-Obr-076418	Oryza brachyantha	27.41	3.00e-63	237.00
IUUC-Ogl-077563	Oryza glaberrima	27.83	7.00e-50	192.00
IUUC-Ogu-077998	Oryza glumaepatula	26.95	8.00e-57	216.00
IUUC-Olo-080953	Oryza longistaminata	26.32	1.00e-49	192.00
IUUC-Ome-081590	Oryza meridionalis	25.56	5.00e-88	319.00
IUUC-Opu-083761	Oryza punctata	27.08	9.00e-57	216.00
IUUC-Oru-084791	Oryza rufipogon	27.38	1.00e-57	218.00
IUUC-Osa-085771	Oryza sativa	27.54	2.00e-57	218.00
IUUC-Ola-086402	Oryzias latipes	51.99	0.00e+00	1345.00
IUUC-Oga-088325	Otolemur garnettii	68.21	0.00e+00	1796.00
IUUC-Oar-089492	Ovis aries	69.48	0.00e+00	1941.00
IUUC-Ptr-091257	Pan troglodytes	70.37	0.00e+00	2003.00
IUUC-Pan-091710	Papio anubis	75.71	0.00e+00	671.00
IUUC-Psi-093960	Pelodiscus sinensis	56.97	0.00e+00	1244.00
IUUC-Pma-094600	Petromyzon marinus	47.41	0.00e+00	1187.00
IUUC-Ppa-095666	Physcomitrella patens	29.16	2.00e-83	304.00
IUUC-Pfo-096345	Poecilia formosa	52.92	0.00e+00	1352.00
IUUC-Pab-098684	Pongo abelii	67.56	0.00e+00	1935.00
IUUC-Pca-100659	Procavia capensis	57.53	0.00e+00	1067.00
IUUC-Pva-102653	Pteropus vampyrus	68.84	0.00e+00	1914.00
IUUC-Rno-105830	Rattus norvegicus	63.29	0.00e+00	1740.00
IUUC-Ssl-108397	Sclerotinia sclerotiorum	40.54	8.80e-02	27.70
IUUC-Sit-110198	Setaria italica	28.15	5.00e-70	259.00
IUUC-Sar-113565	Sorex araneus	50.82	0.00e+00	779.00
IUUC-Ssc-116311	Sus scrofa	70.40	0.00e+00	1949.00
IUUC-Tgu-116706	Taeniopygia guttata	56.64	0.00e+00	1476.00
IUUC-Tru-118512	Takifugu rubripes	52.73	0.00e+00	1274.00
IUUC-Tni-120565	Tetraodon nigroviridis	52.92	0.00e+00	1322.00
IUUC-Tca-121195	Theobroma cacao	28.24	3.00e-68	254.00
IUUC-Tbe-127657	Tupaia belangeri	63.91	0.00e+00	990.00
IUUC-Ttr-128431	Tursiops truncatus	69.26	0.00e+00	1883.00
IUUC-Vpa-130299	Vicugna pacos	64.24	0.00e+00	968.00
IUUC-Vvi-131258	Vitis vinifera	26.79	4.00e-32	133.00
IUUC-Xtr-132684	Xenopus tropicalis	61.07	0.00e+00	1602.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence