iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121855

Ensembl Protein ID

EOY19298

UniProt Accession

A0A061FQW5; A0A061FQW5_THECC

Genbank Protein ID

EOY19298.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001888

Gene Name

TCM_044352

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_044352	EOY19298	EOY19298

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.20e-08	34.5	99	141

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl ++kd   +++lp CgH+fh++C+  w       + + +CP+Cr
   Q: 99   CSICLGEYKDTdmLRLLPdCGHIFHLKCVDPW------LRLHPTCPICR 141
           ********77655888889*************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MNSTEDSNDS TQIGKFAYAI GSSTGIIALL FMITLAAYFC NRANQSTNPS SQHGTTSTDQ 60
DSVAREQGLD EETLSSYPNL LYSQAKLHKP DSVSSASSCS ICLGEYKDTD MLRLLPDCGH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACCTCATTT CTCTTTCTCC CCTGCCCAGA CCCAGCCTCC CTAGCTTGAT CTGATCACCA 60
GCTCAACTTT GCCTCGATCC CTTTGATGTC TAGCAGTTTT GAGTTTCATC GAAAGACATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002979	Amborella trichopoda	57.14	9.00e-29	118.00
IUUC-Lpe-050914	Leersia perrieri	40.58	2.00e-20	90.90
IUUC-Oba-075997	Oryza barthii	35.14	2.00e-19	89.70
IUUC-Ogu-078903	Oryza glumaepatula	44.62	7.00e-21	92.40
IUUC-Oin-079322	Oryza indica	44.09	1.00e-21	95.10
IUUC-Opu-083948	Oryza punctata	41.26	7.00e-23	99.00
IUUC-Ppa-095719	Physcomitrella patens	38.16	2.00e-24	104.00
IUUC-Pop-099356	Populus trichocarpa	63.35	7.00e-53	198.00
IUUC-Ppe-101217	Prunus persica	55.36	2.00e-39	154.00
IUUC-Stu-112013	Solanum tuberosum	56.58	6.00e-34	135.00
IUUC-Sbi-114665	Sorghum bicolor	44.44	2.00e-23	100.00
IUUC-Vvi-130869	Vitis vinifera	38.78	3.00e-20	90.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence