iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017662

Ensembl Protein ID

Bra019181.1-P

UniProt Accession

M4DRN8; M4DRN8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra019181	Bra019181.1	Bra019181.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-07	32.7	334	376
UBD/Alpha-Helix/CUE	7.80e-10	39.5	534	572

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e++ +  + l C+H+fh+ Cl  w  l +  +   +CP+Cr
   Q: 334  CAICREPMAK-AKRLHCNHLFHLGCLRSW--LDQGLNEVYSCPTCR 376
           ********99.888***************..777899999*****8 PP

UBD/Alpha-Helix/CUE

   S: 3    etaleqLkeiFPnldysviqvvLeantgsleaavnnLLeg 42
             ++e+++e++P+l++++i ++L ++t+s+  +vnnLL++
   Q: 534  LAMAETVREVMPHLPDEIIFQDL-QRTNSVAITVNNLLQM 572
           579********************.**************98 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGIRYLHVSV ASTALSFVGL QVWTELSLDR LRADAKNISL GDSEHALDLL LGSYFTIALL 60
TNFVLNVYIL LLLALKNLFF GDLYGVETKK LVERLANYII YKGIFLPLVI PATIFQGVLW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGATAA GGTACTTGCA CGTCTCGGTC GCATCAACTG CTCTGAGCTT TGTGGGGCTT 60
CAAGTCTGGA CAGAGTTGTC TCTGGATAGA CTTAGAGCGG ATGCCAAGAA CATTTCTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003892--CUE
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51140--CUE
PS50089--ZF_RING_2

Pfam

PF02845--CUE
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000658	Aegilops tauschii	39.61	3.00e-22	97.40
IUUC-Atr-003008	Amborella trichopoda	54.07	7.00e-175	606.00
IUUC-Aly-006193	Arabidopsis lyrata	90.14	0.00e+00	991.00
IUUC-Ath-006950	Arabidopsis thaliana	91.18	0.00e+00	1035.00
IUUC-Bdi-014169	Brachypodium distachyon	50.93	4.00e-118	418.00
IUUC-Cin-025215	Ciona intestinalis	25.49	6.00e-33	135.00
IUUC-Csv-026133	Ciona savignyi	29.41	1.00e-33	137.00
IUUC-Fal-036758	Ficedula albicollis	26.19	2.00e-35	143.00
IUUC-Gma-043393	Glycine max	65.87	0.00e+00	784.00
IUUC-Loc-052758	Lepisosteus oculatus	27.14	2.00e-29	124.00
IUUC-Mtr-058643	Medicago truncatula	65.53	0.00e+00	791.00
IUUC-Mac-065495	Musa acuminata	53.36	2.00e-154	538.00
IUUC-Oba-074987	Oryza barthii	41.54	1.00e-84	306.00
IUUC-Obr-076485	Oryza brachyantha	51.59	8.00e-122	430.00
IUUC-Ogu-078481	Oryza glumaepatula	40.79	2.00e-88	319.00
IUUC-Olo-080588	Oryza longistaminata	54.55	1.00e-38	152.00
IUUC-Ome-081941	Oryza meridionalis	43.48	8.00e-96	343.00
IUUC-Oni-082488	Oryza nivara	40.45	5.00e-86	311.00
IUUC-Opu-083500	Oryza punctata	46.11	6.00e-97	347.00
IUUC-Oru-085082	Oryza rufipogon	41.54	1.00e-84	306.00
IUUC-Osa-085509	Oryza sativa	50.85	4.00e-125	441.00
IUUC-Ppa-095969	Physcomitrella patens	43.12	5.00e-119	421.00
IUUC-Pop-099346	Populus trichocarpa	68.43	0.00e+00	803.00
IUUC-Ppe-102033	Prunus persica	67.80	0.00e+00	781.00
IUUC-Smo-109599	Selaginella moellendorffii	44.03	9.00e-111	393.00
IUUC-Sit-110161	Setaria italica	51.27	8.00e-131	460.00
IUUC-Sly-111850	Solanum lycopersicum	61.73	0.00e+00	664.00
IUUC-Sbi-113957	Sorghum bicolor	51.01	7.00e-137	480.00
IUUC-Tca-121783	Theobroma cacao	68.48	0.00e+00	808.00
IUUC-Tae-125510	Triticum aestivum	47.93	6.00e-100	357.00
IUUC-Vvi-130989	Vitis vinifera	68.31	0.00e+00	790.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence