iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012601

Ensembl Protein ID

ENSBTAP00000020184.5

UniProt Accession

Q3ZBU9; UBXN4_BOVIN

Genbank Protein ID

AAI03097.1

Protein Name

UBX domain-containing protein 4; UBX domain-containing protein 2

Genbank Nucleotide ID

BC103096

Gene Name

UBXN4; UBXD2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000015169.5	ENSBTAT00000020184.5	ENSBTAP00000020184.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/UBX	9.10e-19	67.9	316	393

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 2    tteqatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsgsllv 79
           +++ a++q+RlpdG+ ++++Fps+++le+ +qf ++  ++   +F+L + fPrr++++e++++ l +++L+ps+s+++
   Q: 316  RSTVARIQFRLPDGSSFTNQFPSDAPLEEARQFAAQTVGNTYGNFSLATMFPRREFTKEDYKKKLLDLELAPSASVVL 393
           5679***********************************************************************986 PP

Organism

Bos taurus

Functional Description
(View)

Involved in endoplasmic reticulum-associated protein degradation (ERAD). Acts as a platform to recruit both UBQLN1 and VCP to the ER during ERAD.

Protein Sequence
(Fasta)

MLWFQGAIPA AIASAKRSGA VFVVFVAGDD EQSTQMAASW EDEKVTEASS NSFVAIKIDT 60
RSEACLQFSQ IYPVVCVPSS FFIGDSGIPL EVIAGSISAD ELVTRIHKVR QMHSLKGEAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCAGTGGG CCGCTGACGG GTTTGCGCGC CTGTGCGGAG CCGGAGGCGG GGTGCTGACC 60
GGCTGGGGCT GCGGGGGCCG CGGAGCCAGG CGACGGAGAG GGCGGGGCCA ACTCCGGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0472--Membrane
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0834--Unfolded protein response

Interpro

IPR012336--Thioredoxin-like_fold
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS50033--UBX

Pfam

PF00789--UBX

SMART

SM00166--UBX

Gene Ontology

GO:0005829--C:cytosol
GO:0005789--C:endoplasmic reticulum membrane
GO:0005635--C:nuclear envelope
GO:0006986--P:response to unfolded protein
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

bta:536181

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000602	Aegilops tauschii	23.33	1.00e-09	57.40
IUUC-Aml-002137	Ailuropoda melanoleuca	88.12	1.00e-101	361.00
IUUC-Apl-003590	Anas platyrhynchos	72.13	7.00e-149	520.00
IUUC-Aca-005239	Anolis carolinensis	69.29	2.00e-158	552.00
IUUC-Aly-005889	Arabidopsis lyrata	34.26	8.00e-12	65.50
IUUC-Ath-007102	Arabidopsis thaliana	34.26	4.00e-12	66.20
IUUC-Ame-010667	Astyanax mexicanus	64.68	1.00e-73	270.00
IUUC-Bdi-015056	Brachypodium distachyon	23.53	3.00e-08	53.90
IUUC-Cel-018205	Caenorhabditis elegans	24.52	2.00e-23	103.00
IUUC-Cja-018874	Callithrix jacchus	88.24	0.00e+00	792.00
IUUC-Cfa-021091	Canis familiaris	94.29	0.00e+00	749.00
IUUC-Cpo-021590	Cavia porcellus	79.18	0.00e+00	661.00
IUUC-Csa-023978	Chlorocebus sabaeus	91.54	0.00e+00	754.00
IUUC-Cho-024553	Choloepus hoffmanni	72.89	9.00e-156	543.00
IUUC-Cin-025438	Ciona intestinalis	33.73	3.00e-22	98.60
IUUC-Csv-025905	Ciona savignyi	34.03	5.00e-19	87.00
IUUC-Cgl-026427	Colletotrichum gloeosporioides	26.49	2.00e-06	47.40
IUUC-Dre-027410	Danio rerio	59.77	2.00e-21	94.40
IUUC-Dno-029341	Dasypus novemcinctus	83.24	0.00e+00	684.00
IUUC-Dor-030260	Dipodomys ordii	66.08	7.00e-97	347.00
IUUC-Dme-031927	Drosophila melanogaster	43.24	4.00e-12	66.60
IUUC-Ete-032704	Echinops telfairi	69.60	8.00e-94	337.00
IUUC-Eca-033338	Equus caballus	94.30	0.00e+00	750.00
IUUC-Eeu-034735	Erinaceus europaeus	78.42	4.00e-167	580.00
IUUC-Fca-035445	Felis catus	86.14	0.00e+00	695.00
IUUC-Fal-037033	Ficedula albicollis	71.52	6.00e-151	527.00
IUUC-Fox-037707	Fusarium oxysporum	28.09	6.00e-09	55.50
IUUC-Gmo-038720	Gadus morhua	58.93	3.00e-66	245.00
IUUC-Gga-040965	Gallus gallus	71.54	3.00e-157	548.00
IUUC-Gac-041907	Gasterosteus aculeatus	60.98	6.00e-65	241.00
IUUC-Ggo-044983	Gorilla gorilla	77.71	2.00e-170	591.00
IUUC-Hsa-047003	Homo sapiens	91.93	0.00e+00	759.00
IUUC-Hvu-047128	Hordeum vulgare	36.11	5.00e-11	62.40
IUUC-Itr-047924	Ictidomys tridecemlineatus	94.83	8.00e-124	436.00
IUUC-Kpa-049346	Komagataella pastoris	25.00	2.00e-03	37.00
IUUC-Lch-049859	Latimeria chalumnae	62.26	6.00e-142	497.00
IUUC-Lpe-050823	Leersia perrieri	23.91	2.00e-11	63.50
IUUC-Loc-052883	Lepisosteus oculatus	67.22	2.00e-77	283.00
IUUC-Laf-053624	Loxodonta africana	91.16	0.00e+00	691.00
IUUC-Mcc-055456	Macaca mulatta	91.54	0.00e+00	756.00
IUUC-Meu-056658	Macropus eugenii	70.14	5.00e-161	560.00
IUUC-Mor-057066	Magnaporthe oryzae	26.79	2.00e-05	44.30
IUUC-Mpo-057604	Magnaporthe poae	25.89	1.00e-05	44.70
IUUC-Mga-059234	Meleagris gallopavo	71.89	5.00e-150	524.00
IUUC-Mmr-060821	Microcebus murinus	91.96	0.00e+00	779.00
IUUC-Mdo-062524	Monodelphis domestica	84.05	0.00e+00	694.00
IUUC-Mmu-064283	Mus musculus	87.60	0.00e+00	725.00
IUUC-Mac-064888	Musa acuminata	34.29	2.00e-13	70.90
IUUC-Mpu-066521	Mustela putorius furo	92.91	0.00e+00	738.00
IUUC-Mlu-067190	Myotis lucifugus	92.14	0.00e+00	707.00
IUUC-Nle-069046	Nomascus leucogenys	91.14	0.00e+00	696.00
IUUC-Opr-071030	Ochotona princeps	82.50	3.00e-81	295.00
IUUC-Ont-072301	Oreochromis niloticus	65.37	2.00e-77	283.00
IUUC-Oan-073577	Ornithorhynchus anatinus	65.93	1.00e-137	483.00
IUUC-Ocu-074086	Oryctolagus cuniculus	93.31	0.00e+00	764.00
IUUC-Oba-075038	Oryza barthii	26.22	4.00e-10	59.30
IUUC-Obr-076558	Oryza brachyantha	25.33	2.00e-11	63.90
IUUC-Ogl-077635	Oryza glaberrima	34.19	1.00e-12	68.20
IUUC-Ogu-078069	Oryza glumaepatula	26.22	1.00e-09	58.20
IUUC-Oin-079112	Oryza indica	34.19	8.00e-13	68.60
IUUC-Olo-080902	Oryza longistaminata	26.22	3.00e-10	59.70
IUUC-Ome-081339	Oryza meridionalis	24.89	5.00e-10	59.30
IUUC-Oni-083032	Oryza nivara	26.22	4.00e-10	59.30
IUUC-Opu-083735	Oryza punctata	25.11	2.00e-08	54.30
IUUC-Oru-084847	Oryza rufipogon	26.22	3.00e-10	59.70
IUUC-Osa-085514	Oryza sativa	34.19	7.00e-13	68.60
IUUC-Ola-087011	Oryzias latipes	62.50	2.00e-40	157.00
IUUC-Oga-089165	Otolemur garnettii	80.82	0.00e+00	734.00
IUUC-Oar-089397	Ovis aries	90.64	0.00e+00	725.00
IUUC-Ptr-091568	Pan troglodytes	88.78	0.00e+00	799.00
IUUC-Pan-092296	Papio anubis	88.69	0.00e+00	785.00
IUUC-Psi-093004	Pelodiscus sinensis	73.84	3.00e-173	601.00
IUUC-Pma-094440	Petromyzon marinus	48.76	3.00e-76	279.00
IUUC-Ppa-095357	Physcomitrella patens	29.63	4.00e-09	56.60
IUUC-Pfo-097131	Poecilia formosa	53.09	1.00e-125	443.00
IUUC-Pab-098365	Pongo abelii	79.87	0.00e+00	649.00
IUUC-Pop-099823	Populus trichocarpa	32.41	1.00e-11	64.70
IUUC-Pca-100585	Procavia capensis	92.92	2.00e-108	385.00
IUUC-Ppe-101615	Prunus persica	30.56	2.00e-10	60.80
IUUC-Pva-102447	Pteropus vampyrus	92.15	8.00e-174	603.00
IUUC-Rno-105184	Rattus norvegicus	88.19	0.00e+00	718.00
IUUC-Sha-107366	Sarcophilus harrisii	82.98	0.00e+00	706.00
IUUC-Sly-111129	Solanum lycopersicum	25.73	1.00e-08	54.30
IUUC-Sar-113335	Sorex araneus	70.00	7.00e-153	533.00
IUUC-Ssc-115907	Sus scrofa	93.36	0.00e+00	640.00
IUUC-Tgu-116959	Taeniopygia guttata	70.70	3.00e-155	541.00
IUUC-Tru-117812	Takifugu rubripes	59.68	2.00e-75	276.00
IUUC-Tsy-118965	Tarsius syrichta	92.66	7.00e-132	463.00
IUUC-Tni-120776	Tetraodon nigroviridis	57.26	1.00e-71	263.00
IUUC-Tca-121557	Theobroma cacao	34.23	4.00e-10	59.30
IUUC-Tre-122127	Trichoderma reesei	31.82	8.00e-07	48.50
IUUC-Tae-124725	Triticum aestivum	35.19	4.00e-11	63.20
IUUC-Tur-126844	Triticum urartu	24.27	6.00e-09	55.50
IUUC-Tme-127065	Tuber melanosporum	28.67	2.00e-07	49.70
IUUC-Tbe-128049	Tupaia belangeri	94.51	1.00e-37	151.00
IUUC-Ttr-128913	Tursiops truncatus	95.47	0.00e+00	753.00
IUUC-Vda-129816	Verticillium dahliae	23.00	2.00e-04	40.80
IUUC-Vpa-130251	Vicugna pacos	93.95	0.00e+00	659.00
IUUC-Vvi-131692	Vitis vinifera	22.84	4.00e-05	43.10
IUUC-Xtr-131944	Xenopus tropicalis	64.35	4.00e-135	474.00
IUUC-Xma-134134	Xiphophorus maculatus	54.00	4.00e-126	444.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence