iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115465

Ensembl Protein ID

ENSSSCP00000021783.1

UniProt Accession

I3LCK8; I3LCK8_PIG

Protein Name

Uncharacterized protein

Gene Name

RNF25

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000029880.1	ENSSSCT00000028058.1	ENSSSCP00000021783.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-06	28.3	132	199

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkw................pglknssskefr..............CPlCr 46
           C iCl+ f  k+    +pC H fh +Cl ++                +          +              CP+Cr
   Q: 132  CVICLYGFqeKEAFTKTPCYHYFHCHCLARYiqhmehelqaqgreqeQ----------QrqhaaakqkavgvqCPVCR 199
           ********65333556************99988877776654333331..........034456666777777****8 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

LHTSGRPGSG REERVLPSEV EVLESIYLDE LQVVKGNSRS SPWEISITLH PATAEDQDSQ 60
YVCFTLVLQV YPHEVPQISI RNPRGLSDEQ IHKISQALSH VAEAGLGAAM LYELIEKGKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCACACAT CTGGGAGGCC TGGTTCGGGC AGGGAAGAAA GGTTAAAGTT AGCTGCCTTG 60
CCTTTTCCTC TTTTTCACAA CAATCCAGGC CTCATAAACA AGAAAAGGTG GAGGGGACGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006575--RWD-domain
IPR016135--UBQ-conjugating_enzyme/RWD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50908--RWD
PS50089--ZF_RING_2

Pfam

PF05773--RWD

SMART

SM00184--RING
SM00591--RWD

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001954	Ailuropoda melanoleuca	88.22	0.00e+00	694.00
IUUC-Atr-002830	Amborella trichopoda	25.16	9.00e-14	70.90
IUUC-Apl-003293	Anas platyrhynchos	68.24	2.00e-92	332.00
IUUC-Aca-005092	Anolis carolinensis	46.95	3.00e-101	362.00
IUUC-Aly-005434	Arabidopsis lyrata	27.48	5.00e-16	78.20
IUUC-Ath-006770	Arabidopsis thaliana	29.39	3.00e-16	79.00
IUUC-Ame-011754	Astyanax mexicanus	47.43	5.00e-58	218.00
IUUC-Bta-012592	Bos taurus	85.40	0.00e+00	689.00
IUUC-Bdi-015061	Brachypodium distachyon	25.00	7.00e-14	71.20
IUUC-Bol-015743	Brassica oleracea	29.84	3.00e-15	75.90
IUUC-Bra-018072	Brassica rapa	28.10	6.00e-14	71.20
IUUC-Cel-018515	Caenorhabditis elegans	24.06	3.00e-04	38.90
IUUC-Cja-018930	Callithrix jacchus	84.00	0.00e+00	701.00
IUUC-Cfa-020156	Canis familiaris	89.11	0.00e+00	733.00
IUUC-Cpo-021290	Cavia porcellus	80.70	0.00e+00	687.00
IUUC-Csa-023214	Chlorocebus sabaeus	84.89	0.00e+00	705.00
IUUC-Cin-025416	Ciona intestinalis	31.03	3.00e-43	168.00
IUUC-Csv-026360	Ciona savignyi	36.33	9.00e-42	164.00
IUUC-Dre-028670	Danio rerio	45.45	6.00e-54	204.00
IUUC-Dno-029970	Dasypus novemcinctus	83.66	0.00e+00	713.00
IUUC-Dor-030152	Dipodomys ordii	77.25	0.00e+00	639.00
IUUC-Dme-031914	Drosophila melanogaster	37.50	3.00e-37	148.00
IUUC-Ete-033105	Echinops telfairi	76.11	7.00e-154	536.00
IUUC-Eca-033800	Equus caballus	88.67	0.00e+00	687.00
IUUC-Eeu-034525	Erinaceus europaeus	65.78	7.00e-124	436.00
IUUC-Fca-035644	Felis catus	89.56	0.00e+00	765.00
IUUC-Fal-037121	Ficedula albicollis	51.90	5.00e-106	377.00
IUUC-Gmo-039444	Gadus morhua	51.00	7.00e-59	220.00
IUUC-Gga-041221	Gallus gallus	43.49	6.00e-72	264.00
IUUC-Gac-042354	Gasterosteus aculeatus	49.28	2.00e-65	242.00
IUUC-Gma-043721	Glycine max	27.22	2.00e-13	69.70
IUUC-Ggo-044879	Gorilla gorilla	84.67	0.00e+00	704.00
IUUC-Hsa-045739	Homo sapiens	84.67	0.00e+00	707.00
IUUC-Itr-047915	Ictidomys tridecemlineatus	83.56	0.00e+00	673.00
IUUC-Lch-050277	Latimeria chalumnae	60.57	3.00e-67	248.00
IUUC-Lpe-051139	Leersia perrieri	27.73	4.00e-15	75.10
IUUC-Loc-052367	Lepisosteus oculatus	58.23	4.00e-19	85.50
IUUC-Laf-053559	Loxodonta africana	79.78	0.00e+00	695.00
IUUC-Mcc-055367	Macaca mulatta	77.78	0.00e+00	645.00
IUUC-Meu-056730	Macropus eugenii	71.91	2.00e-147	515.00
IUUC-Mtr-058418	Medicago truncatula	27.57	2.00e-12	66.20
IUUC-Mga-060090	Meleagris gallopavo	44.02	2.00e-67	249.00
IUUC-Mmr-060618	Microcebus murinus	85.33	0.00e+00	716.00
IUUC-Mdo-063084	Monodelphis domestica	72.22	1.00e-153	535.00
IUUC-Mmu-063854	Mus musculus	76.47	0.00e+00	658.00
IUUC-Mac-064922	Musa acuminata	28.79	1.00e-17	84.00
IUUC-Mpu-066419	Mustela putorius furo	87.78	0.00e+00	712.00
IUUC-Mlu-067289	Myotis lucifugus	83.04	0.00e+00	696.00
IUUC-Nle-069090	Nomascus leucogenys	84.89	0.00e+00	728.00
IUUC-Opr-070601	Ochotona princeps	78.89	3.00e-180	624.00
IUUC-Ont-072434	Oreochromis niloticus	53.15	2.00e-67	249.00
IUUC-Ocu-074855	Oryctolagus cuniculus	79.78	0.00e+00	653.00
IUUC-Oba-075792	Oryza barthii	25.38	2.00e-15	76.60
IUUC-Obr-076917	Oryza brachyantha	27.27	3.00e-17	82.00
IUUC-Ogl-077872	Oryza glaberrima	26.02	1.00e-13	70.50
IUUC-Ogu-078151	Oryza glumaepatula	26.62	5.00e-15	75.10
IUUC-Oin-079465	Oryza indica	26.62	2.00e-15	75.90
IUUC-Olo-080907	Oryza longistaminata	24.64	1.00e-10	61.20
IUUC-Ome-081752	Oryza meridionalis	26.44	8.00e-15	74.30
IUUC-Oni-082420	Oryza nivara	26.62	5.00e-15	75.10
IUUC-Opu-083810	Oryza punctata	27.20	6.00e-16	77.80
IUUC-Oru-085177	Oryza rufipogon	25.38	2.00e-15	76.60
IUUC-Ola-087231	Oryzias latipes	54.41	1.00e-50	191.00
IUUC-Oga-088963	Otolemur garnettii	83.22	0.00e+00	711.00
IUUC-Oar-089292	Ovis aries	85.65	0.00e+00	756.00
IUUC-Ptr-091214	Pan troglodytes	84.67	0.00e+00	708.00
IUUC-Pan-092823	Papio anubis	85.11	0.00e+00	757.00
IUUC-Psi-094084	Pelodiscus sinensis	63.48	6.00e-36	144.00
IUUC-Pfo-096406	Poecilia formosa	48.82	2.00e-61	229.00
IUUC-Pab-098212	Pongo abelii	84.89	0.00e+00	706.00
IUUC-Pop-099369	Populus trichocarpa	23.91	6.00e-12	64.70
IUUC-Pca-100897	Procavia capensis	75.11	3.00e-171	594.00
IUUC-Ppe-101702	Prunus persica	22.86	3.00e-09	55.50
IUUC-Pva-102899	Pteropus vampyrus	88.22	0.00e+00	720.00
IUUC-Rno-105369	Rattus norvegicus	77.12	0.00e+00	673.00
IUUC-Sha-107344	Sarcophilus harrisii	71.30	5.00e-148	517.00
IUUC-Smo-109636	Selaginella moellendorffii	24.50	1.00e-07	48.90
IUUC-Sit-109795	Setaria italica	26.72	2.00e-16	79.70
IUUC-Sly-111014	Solanum lycopersicum	26.67	8.00e-15	75.50
IUUC-Stu-112139	Solanum tuberosum	26.67	7.00e-17	81.30
IUUC-Sar-113487	Sorex araneus	66.04	8.00e-57	214.00
IUUC-Sbi-114714	Sorghum bicolor	28.92	5.00e-16	78.20
IUUC-Tgu-117113	Taeniopygia guttata	71.49	8.00e-91	327.00
IUUC-Tsy-119186	Tarsius syrichta	78.01	1.00e-59	223.00
IUUC-Tni-120219	Tetraodon nigroviridis	53.06	9.00e-37	145.00
IUUC-Tca-121748	Theobroma cacao	26.52	4.00e-12	65.10
IUUC-Tae-123014	Triticum aestivum	27.05	1.00e-13	70.50
IUUC-Tbe-127584	Tupaia belangeri	68.88	9.00e-105	373.00
IUUC-Ttr-128244	Tursiops truncatus	88.89	0.00e+00	710.00
IUUC-Vpa-130354	Vicugna pacos	92.58	0.00e+00	767.00
IUUC-Xtr-132402	Xenopus tropicalis	51.97	2.00e-70	259.00
IUUC-Xma-133442	Xiphophorus maculatus	48.31	3.00e-62	232.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence