iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-004055

Ensembl Protein ID

ENSAPLP00000014192.1

UniProt Accession

U3J3W5; U3J3W5_ANAPL

Genbank Protein ID

ENSAPLP00000014192

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01030150

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000014316.1	ENSAPLT00000014967.1	ENSAPLP00000014192.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	8.90e-10	38.1	224	261

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+a+qaL +++nnleaA+++Ll+
   Q: 224  DEKALKHITEMGFSKEAARQALMDNSNNLEAALNFLLN 261
           78999*******************************97 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

LEGPCVLQIQ KIRNVAAPKD NEESQAAPRM LRLQMTDGHT SCTAIEYSSM SKISLNTPPG 60
TKIKLSGIVE VRNGFLLLDD SNTAVLGGEV EHLIEKWELQ RSLAKHNRSN IGTEGGPPPF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGTATCTT TCAGATGAAG GAATCGAAGC TTGTATAAGT TCATCTGAAA AAGTCAATAC 60
AAATGACATT ATCCTAGTTG CCCTTAATGT AAGTTATGAT TGTGAACTTT TTTTCTGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013894--RMI1_N
IPR010304--Survival_motor_neuron
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF06003--SMN
PF00627--UBA

SMART

SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0005737--C:cytoplasm
GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity
GO:0006397--P:mRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	34.13	3.00e-16	79.00
IUUC-Aml-001751	Ailuropoda melanoleuca	76.75	0.00e+00	974.00
IUUC-Atr-002788	Amborella trichopoda	31.50	1.00e-16	80.50
IUUC-Aca-004367	Anolis carolinensis	77.09	0.00e+00	986.00
IUUC-Aly-006072	Arabidopsis lyrata	37.59	8.00e-20	91.30
IUUC-Ath-007491	Arabidopsis thaliana	36.84	2.00e-19	89.70
IUUC-Ame-011439	Astyanax mexicanus	68.67	1.00e-88	320.00
IUUC-Bta-012894	Bos taurus	75.81	0.00e+00	982.00
IUUC-Bdi-014462	Brachypodium distachyon	33.07	1.00e-16	80.90
IUUC-Bol-015343	Brassica oleracea	38.28	7.00e-19	88.20
IUUC-Bra-016787	Brassica rapa	34.66	1.00e-19	90.50
IUUC-Cel-018154	Caenorhabditis elegans	36.76	1.00e-26	114.00
IUUC-Cja-019364	Callithrix jacchus	75.50	0.00e+00	925.00
IUUC-Cfa-021166	Canis familiaris	75.77	0.00e+00	943.00
IUUC-Cpo-021678	Cavia porcellus	66.94	0.00e+00	753.00
IUUC-Csa-023299	Chlorocebus sabaeus	76.25	0.00e+00	1014.00
IUUC-Cho-024694	Choloepus hoffmanni	87.11	2.00e-126	446.00
IUUC-Cin-025191	Ciona intestinalis	44.91	1.00e-34	139.00
IUUC-Csv-026348	Ciona savignyi	50.98	1.00e-11	60.80
IUUC-Dre-028715	Danio rerio	50.28	2.00e-155	542.00
IUUC-Dno-030091	Dasypus novemcinctus	75.66	0.00e+00	981.00
IUUC-Dor-030807	Dipodomys ordii	65.24	0.00e+00	759.00
IUUC-Dme-031770	Drosophila melanogaster	34.69	1.00e-35	144.00
IUUC-Ete-032507	Echinops telfairi	55.17	9.00e-148	516.00
IUUC-Eca-033406	Equus caballus	74.70	0.00e+00	819.00
IUUC-Eeu-034600	Erinaceus europaeus	68.71	0.00e+00	785.00
IUUC-Fca-035916	Felis catus	76.54	0.00e+00	970.00
IUUC-Fal-036658	Ficedula albicollis	92.32	0.00e+00	1155.00
IUUC-Gmo-038974	Gadus morhua	64.06	2.00e-85	309.00
IUUC-Gga-040195	Gallus gallus	93.35	0.00e+00	1230.00
IUUC-Gac-042537	Gasterosteus aculeatus	46.07	2.00e-145	508.00
IUUC-Gma-044234	Glycine max	40.00	1.00e-20	94.00
IUUC-Ggo-044715	Gorilla gorilla	74.35	0.00e+00	945.00
IUUC-Hsa-045814	Homo sapiens	76.54	0.00e+00	1015.00
IUUC-Hvu-047365	Hordeum vulgare	34.11	6.00e-16	78.20
IUUC-Itr-047866	Ictidomys tridecemlineatus	75.66	0.00e+00	974.00
IUUC-Kpa-049313	Komagataella pastoris	28.57	4.00e-03	36.60
IUUC-Lch-050393	Latimeria chalumnae	63.08	0.00e+00	735.00
IUUC-Lpe-050691	Leersia perrieri	33.86	2.00e-17	83.20
IUUC-Loc-052859	Lepisosteus oculatus	56.46	3.00e-178	618.00
IUUC-Laf-053953	Loxodonta africana	71.60	0.00e+00	655.00
IUUC-Mcc-055846	Macaca mulatta	75.95	0.00e+00	1010.00
IUUC-Meu-056790	Macropus eugenii	64.01	0.00e+00	788.00
IUUC-Mtr-058749	Medicago truncatula	39.84	1.00e-16	80.50
IUUC-Mla-058959	Melampsora laricipopulina	47.06	2.00e-08	53.10
IUUC-Mga-059656	Meleagris gallopavo	92.76	0.00e+00	1159.00
IUUC-Mmr-061089	Microcebus murinus	74.34	0.00e+00	904.00
IUUC-Mdo-063043	Monodelphis domestica	63.62	0.00e+00	680.00
IUUC-Mmu-063654	Mus musculus	70.38	0.00e+00	874.00
IUUC-Mac-064947	Musa acuminata	36.15	4.00e-13	68.60
IUUC-Mpu-066115	Mustela putorius furo	74.92	0.00e+00	832.00
IUUC-Mlu-066974	Myotis lucifugus	76.17	0.00e+00	931.00
IUUC-Nle-069184	Nomascus leucogenys	76.54	0.00e+00	1022.00
IUUC-Opr-070770	Ochotona princeps	65.85	0.00e+00	793.00
IUUC-Ont-072040	Oreochromis niloticus	47.46	5.00e-156	544.00
IUUC-Oan-073448	Ornithorhynchus anatinus	81.31	3.00e-65	240.00
IUUC-Ocu-074405	Oryctolagus cuniculus	76.39	0.00e+00	976.00
IUUC-Oba-075977	Oryza barthii	31.50	1.00e-10	60.50
IUUC-Obr-076298	Oryza brachyantha	33.07	3.00e-16	79.30
IUUC-Ogl-077706	Oryza glaberrima	32.28	8.00e-11	61.20
IUUC-Ogu-078381	Oryza glumaepatula	32.06	1.00e-11	63.50
IUUC-Oin-080150	Oryza indica	32.82	3.00e-11	62.80
IUUC-Ome-081153	Oryza meridionalis	32.06	1.00e-10	60.80
IUUC-Oni-083115	Oryza nivara	32.06	6.00e-11	61.20
IUUC-Opu-083860	Oryza punctata	31.30	2.00e-15	76.60
IUUC-Oru-084859	Oryza rufipogon	32.82	4.00e-11	62.00
IUUC-Osa-085567	Oryza sativa	32.82	4.00e-10	58.90
IUUC-Ola-087049	Oryzias latipes	46.06	6.00e-148	517.00
IUUC-Oga-088455	Otolemur garnettii	75.07	0.00e+00	969.00
IUUC-Oar-090096	Ovis aries	75.37	0.00e+00	979.00
IUUC-Ptr-090974	Pan troglodytes	75.19	0.00e+00	963.00
IUUC-Pan-092657	Papio anubis	75.95	0.00e+00	1017.00
IUUC-Psi-093113	Pelodiscus sinensis	84.18	0.00e+00	1054.00
IUUC-Ppa-095466	Physcomitrella patens	40.50	3.00e-21	96.30
IUUC-Pfo-096631	Poecilia formosa	46.92	3.00e-147	514.00
IUUC-Pab-098070	Pongo abelii	76.39	0.00e+00	1016.00
IUUC-Pop-099235	Populus trichocarpa	33.33	8.00e-17	81.30
IUUC-Pca-101032	Procavia capensis	68.25	0.00e+00	848.00
IUUC-Ppe-101793	Prunus persica	34.65	5.00e-19	88.20
IUUC-Pva-102290	Pteropus vampyrus	74.43	0.00e+00	921.00
IUUC-Rno-105080	Rattus norvegicus	69.48	0.00e+00	793.00
IUUC-Sha-107598	Sarcophilus harrisii	72.95	0.00e+00	953.00
IUUC-Sit-110735	Setaria italica	32.06	7.00e-16	77.80
IUUC-Sly-111126	Solanum lycopersicum	38.28	1.00e-15	77.00
IUUC-Stu-112780	Solanum tuberosum	38.58	6.00e-19	88.20
IUUC-Sar-113418	Sorex araneus	74.12	0.00e+00	901.00
IUUC-Sbi-113925	Sorghum bicolor	33.59	9.00e-16	77.80
IUUC-Ssc-115712	Sus scrofa	76.87	0.00e+00	997.00
IUUC-Tgu-117148	Taeniopygia guttata	92.61	0.00e+00	1201.00
IUUC-Tru-117831	Takifugu rubripes	59.08	8.00e-115	407.00
IUUC-Tsy-118917	Tarsius syrichta	72.89	0.00e+00	862.00
IUUC-Tni-120783	Tetraodon nigroviridis	46.54	2.00e-148	519.00
IUUC-Tca-121430	Theobroma cacao	43.75	7.00e-06	45.10
IUUC-Tae-123752	Triticum aestivum	34.13	2.00e-16	79.70
IUUC-Tur-126238	Triticum urartu	35.38	4.00e-15	75.50
IUUC-Ttr-128615	Tursiops truncatus	69.17	0.00e+00	827.00
IUUC-Vpa-130531	Vicugna pacos	76.42	0.00e+00	940.00
IUUC-Vvi-131607	Vitis vinifera	37.50	7.00e-14	71.20
IUUC-Xtr-132787	Xenopus tropicalis	60.20	0.00e+00	728.00
IUUC-Xma-133815	Xiphophorus maculatus	46.99	3.00e-145	508.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence