iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002978

Ensembl Protein ID

ERN19309

UniProt Accession

U5D9X8; U5D9X8_AMBTC

Genbank Protein ID

ERN19309.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392069

Gene Name

AMTR_s00069p00052390

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00069p00052390	ERN19309	ERN19309

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.20e-09	36.6	40	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vC vC +gg+   +l+ C+ C++ fH  Cl +     +p+s+ w+C++C++
   Q: 40   VCEVCSSGGNAA-ELLLCDGCDHGFHIFCLRPI-LARVPSSS-WFCTSCSN 87
           8*********87.5******************9.*******8.******85 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MGKTKPVACN PRFRRRTQAP APLQKKSDGN VSSSSYSDLV CEVCSSGGNA AELLLCDGCD 60
HGFHIFCLRP ILARVPSSSW FCTSCSNRRN YKQFPLVQTK IVDFFRICRS SNDALHKSPQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCAAAA CAAAACCGGT GGCCTGTAAC CCTAGATTTC GAAGGAGAAC TCAGGCACCG 60
GCTCCTCTCC AGAAGAAGAG CGATGGCAAT GTGTCTTCTT CTTCTTATTC AGATCTGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0046976--F:histone methyltransferase activity (H3-K27 specific)
GO:0008270--F:zinc ion binding
GO:0009901--P:anther dehiscence
GO:0051726--P:regulation of cell cycle
GO:0006275--P:regulation of DNA replication

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014900	Brachypodium distachyon	68.23	1.00e-86	311.00
IUUC-Csv-026207	Ciona savignyi	52.46	2.00e-14	70.90
IUUC-Dre-027413	Danio rerio	51.72	5.00e-13	69.70
IUUC-Dor-030774	Dipodomys ordii	43.64	7.00e-12	65.90
IUUC-Dme-032220	Drosophila melanogaster	44.26	1.00e-13	72.80
IUUC-Ete-033052	Echinops telfairi	45.45	3.00e-12	67.40
IUUC-Gma-044242	Glycine max	53.91	2.00e-27	112.00
IUUC-Lpe-051351	Leersia perrieri	71.79	6.00e-104	369.00
IUUC-Laf-054028	Loxodonta africana	35.56	6.00e-12	64.70
IUUC-Mtr-057790	Medicago truncatula	65.97	2.00e-93	334.00
IUUC-Ont-071565	Oreochromis niloticus	47.54	1.00e-12	68.20
IUUC-Oba-075648	Oryza barthii	60.07	9.00e-94	335.00
IUUC-Obr-076539	Oryza brachyantha	61.51	8.00e-92	329.00
IUUC-Ogl-076971	Oryza glaberrima	60.44	2.00e-94	337.00
IUUC-Ogu-078790	Oryza glumaepatula	60.44	2.00e-94	337.00
IUUC-Oin-079240	Oryza indica	60.44	3.00e-94	337.00
IUUC-Ome-081195	Oryza meridionalis	60.89	4.00e-94	337.00
IUUC-Oni-082728	Oryza nivara	60.44	2.00e-94	337.00
IUUC-Opu-083473	Oryza punctata	62.26	2.00e-94	337.00
IUUC-Oru-084688	Oryza rufipogon	60.44	2.00e-94	337.00
IUUC-Psi-092932	Pelodiscus sinensis	43.64	1.00e-12	68.20
IUUC-Pfo-096939	Poecilia formosa	45.90	8.00e-13	68.90
IUUC-Pop-099061	Populus trichocarpa	67.58	6.00e-108	382.00
IUUC-Pva-102893	Pteropus vampyrus	43.64	1.00e-11	65.10
IUUC-Sit-109938	Setaria italica	67.62	2.00e-96	344.00
IUUC-Sar-113192	Sorex araneus	43.64	2.00e-11	64.70
IUUC-Sbi-114173	Sorghum bicolor	64.87	1.00e-95	341.00
IUUC-Tru-118265	Takifugu rubripes	44.07	5.00e-11	63.20
IUUC-Tca-120995	Theobroma cacao	66.44	8.00e-112	395.00
IUUC-Tae-124910	Triticum aestivum	68.95	8.00e-88	315.00
IUUC-Vpa-130046	Vicugna pacos	43.64	1.00e-11	65.10
IUUC-Vvi-131714	Vitis vinifera	73.58	6.00e-102	362.00
IUUC-Xtr-132132	Xenopus tropicalis	41.27	7.00e-13	69.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence