iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005626

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348717

Gene Name

ARALYDRAFT_907695

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_503399.1	scaffold_503399.1	scaffold_503399.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-06	28.7	135	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++++  ++ +p C+H fh  Cl +w       + + +CP+Cr
   Q: 135  CSICLCEYMEEemLRMMPeCKHYFHVYCLDAW------LKLNGSCPVCR 177
           *******966656888889*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSTAAAVFPP PPPVPIPTYI TSLGLGYSIA IALGFLVLIS TIILSSYICC RASRLRFSAS 60
AATANANASF RDRSVIVPRI IFVAEDDDLE SGNVVVGGLD HSIINSYPKF HFTKDITAVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAACCTCTTT CTTCACCATC AAATGTCAAC CGCCGCCGCC GTCTTTCCTC CTCCGCCTCC 60
TGTCCCTATC CCTACCTATA TAACTAGCCT CGGCCTTGGC TACTCCATAG CCATAGCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_907695

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000942	Aegilops tauschii	76.32	3.00e-25	105.00
IUUC-Atr-002663	Amborella trichopoda	52.20	1.00e-30	125.00
IUUC-Ath-007050	Arabidopsis thaliana	95.88	2.00e-84	303.00
IUUC-Bdi-015029	Brachypodium distachyon	54.17	4.00e-28	117.00
IUUC-Bol-015802	Brassica oleracea	77.50	2.00e-70	257.00
IUUC-Bra-017359	Brassica rapa	77.00	2.00e-63	234.00
IUUC-Hvu-047604	Hordeum vulgare	49.24	6.00e-38	149.00
IUUC-Lpe-050991	Leersia perrieri	53.42	3.00e-35	140.00
IUUC-Mtr-058250	Medicago truncatula	53.19	2.00e-24	105.00
IUUC-Mvi-060376	Microbotryum violaceum	39.24	5.00e-09	55.50
IUUC-Mac-064920	Musa acuminata	57.45	2.00e-22	97.80
IUUC-Oba-075352	Oryza barthii	50.25	6.00e-31	126.00
IUUC-Obr-076398	Oryza brachyantha	49.24	3.00e-30	123.00
IUUC-Ogl-077080	Oryza glaberrima	50.25	6.00e-31	126.00
IUUC-Ogu-077991	Oryza glumaepatula	50.25	6.00e-31	126.00
IUUC-Oin-080020	Oryza indica	50.25	6.00e-31	126.00
IUUC-Olo-080906	Oryza longistaminata	50.25	6.00e-31	126.00
IUUC-Ome-081299	Oryza meridionalis	50.25	6.00e-31	126.00
IUUC-Oni-082889	Oryza nivara	50.25	9.00e-31	125.00
IUUC-Opu-084024	Oryza punctata	50.25	4.00e-31	126.00
IUUC-Oru-084432	Oryza rufipogon	50.25	9.00e-31	125.00
IUUC-Osa-085873	Oryza sativa	50.25	9.00e-31	125.00
IUUC-Pop-099130	Populus trichocarpa	62.31	1.00e-44	171.00
IUUC-Ppe-101378	Prunus persica	54.24	7.00e-24	103.00
IUUC-Sit-110496	Setaria italica	49.04	5.00e-31	127.00
IUUC-Sly-111309	Solanum lycopersicum	55.38	5.00e-36	143.00
IUUC-Stu-112524	Solanum tuberosum	55.38	6.00e-36	143.00
IUUC-Sbi-113964	Sorghum bicolor	48.26	2.00e-39	154.00
IUUC-Tae-125019	Triticum aestivum	50.52	3.00e-33	134.00
IUUC-Tur-126402	Triticum urartu	50.26	1.00e-32	132.00
IUUC-Vvi-130869	Vitis vinifera	56.84	2.00e-40	157.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence