iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111463

Ensembl Protein ID

Solyc02g072080.1.1

UniProt Accession

K4B8I3; K4B8I3_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc02g072080.1	Solyc02g072080.1.1	Solyc02g072080.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.80e-32	112.0	296	368

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +vp++f+CpIsl+lMrdPv++++G+tydr+sI +w+++g+ tcP+t+q l+++ lvPn +lr+li +wc++++
   Q: 296  SVPKDFCCPISLDLMRDPVIVATGQTYDRASISRWMEEGHCTCPKTGQLLDHTRLVPNRALRNLIMHWCAARK 368
           59*******************************************************************9876 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MASAAIFSSL RRQRSPTLEA FLAPVDLTDV GLLQTLTALS SELISAYSGK RLPFYQRKNC 60
KSLLRKIQVF SVLLECLLEN KKNRSSGSSD LPFTAFLCFK ELYLLLYRSK ILLDYCSYSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATCTG CTGCAATTTT CTCATCGTTG AGAAGACAAA GGTCGCCGAC ACTGGAAGCG 60
TTCTTGGCGC CGGTGGATCT GACAGATGTT GGGTTGTTGC AAACTTTAAC GGCGTTATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101245319

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001129	Aegilops tauschii	47.69	1.00e-135	476.00
IUUC-Aly-006027	Arabidopsis lyrata	67.97	0.00e+00	871.00
IUUC-Ath-007054	Arabidopsis thaliana	67.31	0.00e+00	856.00
IUUC-Bdi-014675	Brachypodium distachyon	46.42	7.00e-139	487.00
IUUC-Bol-015991	Brassica oleracea	65.07	0.00e+00	780.00
IUUC-Bra-017296	Brassica rapa	66.09	0.00e+00	783.00
IUUC-Gma-043020	Glycine max	76.56	0.00e+00	1006.00
IUUC-Hvu-047822	Hordeum vulgare	47.04	1.00e-149	522.00
IUUC-Lch-050386	Latimeria chalumnae	38.96	1.00e-10	60.50
IUUC-Lpe-051105	Leersia perrieri	48.74	2.00e-143	502.00
IUUC-Mtr-057764	Medicago truncatula	73.77	0.00e+00	958.00
IUUC-Mac-065609	Musa acuminata	47.83	2.00e-164	571.00
IUUC-Oba-075480	Oryza barthii	51.40	2.00e-141	494.00
IUUC-Obr-076773	Oryza brachyantha	55.41	2.00e-89	321.00
IUUC-Ogl-077156	Oryza glaberrima	48.42	1.00e-151	529.00
IUUC-Ogu-078640	Oryza glumaepatula	48.42	6.00e-152	530.00
IUUC-Oin-079253	Oryza indica	46.21	4.00e-139	488.00
IUUC-Olo-080903	Oryza longistaminata	51.12	5.00e-141	493.00
IUUC-Ome-081982	Oryza meridionalis	47.96	9.00e-151	526.00
IUUC-Oni-082824	Oryza nivara	48.42	6.00e-152	530.00
IUUC-Opu-083758	Oryza punctata	48.26	2.00e-149	522.00
IUUC-Oru-084718	Oryza rufipogon	48.42	6.00e-152	530.00
IUUC-Osa-085662	Oryza sativa	49.57	2.00e-145	508.00
IUUC-Ppa-095610	Physcomitrella patens	42.45	2.00e-130	458.00
IUUC-Pop-099239	Populus trichocarpa	75.04	0.00e+00	944.00
IUUC-Ppe-101890	Prunus persica	74.66	0.00e+00	924.00
IUUC-Smo-109110	Selaginella moellendorffii	40.78	4.00e-121	428.00
IUUC-Sit-110022	Setaria italica	48.67	4.00e-148	517.00
IUUC-Stu-111976	Solanum tuberosum	98.07	0.00e+00	1323.00
IUUC-Sbi-114100	Sorghum bicolor	48.43	1.00e-149	523.00
IUUC-Tca-121221	Theobroma cacao	76.10	0.00e+00	998.00
IUUC-Tae-124437	Triticum aestivum	47.20	8.00e-150	523.00
IUUC-Tur-126627	Triticum urartu	50.78	9.00e-131	459.00
IUUC-Vvi-131159	Vitis vinifera	71.88	0.00e+00	886.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence