iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135716

Ensembl Protein ID

Zm00001d040343_T001

UniProt Accession

C0PG74; C0PG74_MAIZE

Genbank Protein ID

ACN34190.1; ONM31197.1; ONM31198.1; ONM31200.1

Protein Name

Putative splicing factor 3A subunit 1

Genbank Nucleotide ID

BT067293; CM007649; CM007649; CM007649

Gene Name

ZEAMMB73_Zm00001d040343

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d040343	Zm00001d040343_T004	Zm00001d040343_T004
Zm00001d040343	Zm00001d040343_T001	Zm00001d040343_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	3.00e-12	48.2	746	804

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 18   npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksgg 76
           + sdtV+ LKe+i ++l +p+++q+L ++   L+d+ tLa+y++ +g +i l+++++gg
   Q: 746  SLSDTVGSLKEQIAGELQLPANKQKLSVRTSFLKDNLTLAYYNVGPGVVINLTLRERGG 804
           7799**************************************************99875 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MPAAMGTPIL TLPAPDGNGT GGGDANQQLL QAPPKPPPPG AKTDPPATVA THTRTIGIIH 60
PPPDIRVIIE KTATFVAKNG PEFERRIISL NQGNAKFNFL QPSDPYHAYY QHRVSEIAAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGCCG TGACGGGGTC TGTCGTGTCT CGTAGGAGTG ACGGGGTCTG TCGTGTCTCG 60
ACCCGACCTC CCTCCCTCCC TCCTTCCGTT CCGATCTAAA CCCGCCGAAA CCCTAATCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2

Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin

SMART

SM00648--SWAP
SM00213--UBQ

Gene Ontology

GO:0003723--F:RNA binding
GO:0006396--P:RNA processing

KEGG

zma:100383468

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000319	Aegilops tauschii	79.40	0.00e+00	798.00
IUUC-Atr-003001	Amborella trichopoda	63.25	5.00e-175	607.00
IUUC-Apl-003584	Anas platyrhynchos	42.16	7.00e-48	185.00
IUUC-Aca-004690	Anolis carolinensis	41.11	1.00e-52	201.00
IUUC-Aly-005487	Arabidopsis lyrata	62.50	5.00e-169	587.00
IUUC-Ath-007275	Arabidopsis thaliana	63.12	1.00e-172	599.00
IUUC-Acl-008320	Aspergillus clavatus	44.85	4.00e-23	102.00
IUUC-Afl-008707	Aspergillus flavus	39.41	1.00e-43	170.00
IUUC-Ani-009307	Aspergillus nidulans	37.08	7.00e-40	157.00
IUUC-Ang-009761	Aspergillus niger	45.78	6.00e-30	125.00
IUUC-Aor-010067	Aspergillus oryzae	39.41	1.00e-43	170.00
IUUC-Bci-013842	Botrytis cinerea	41.32	2.00e-25	110.00
IUUC-Bdi-014436	Brachypodium distachyon	79.82	0.00e+00	979.00
IUUC-Bra-017856	Brassica rapa	56.42	2.00e-177	615.00
IUUC-Cel-018261	Caenorhabditis elegans	32.07	2.00e-49	190.00
IUUC-Cpo-021759	Cavia porcellus	45.18	3.00e-33	136.00
IUUC-Cin-025640	Ciona intestinalis	43.45	1.00e-37	151.00
IUUC-Csv-025855	Ciona savignyi	39.17	4.00e-57	216.00
IUUC-Cgl-026573	Colletotrichum gloeosporioides	36.61	5.00e-38	151.00
IUUC-Cne-026952	Cryptococcus neoformans	29.91	2.00e-44	173.00
IUUC-Dre-028055	Danio rerio	41.33	2.00e-48	187.00
IUUC-Dno-029259	Dasypus novemcinctus	37.87	4.00e-44	172.00
IUUC-Dse-031438	Dothistroma septosporum	34.36	1.00e-35	144.00
IUUC-Dme-031975	Drosophila melanogaster	35.01	1.00e-61	230.00
IUUC-Ete-033177	Echinops telfairi	39.53	5.00e-51	195.00
IUUC-Fal-036776	Ficedula albicollis	42.11	4.00e-46	179.00
IUUC-Fox-037706	Fusarium oxysporum	35.23	2.00e-37	149.00
IUUC-Fso-038313	Fusarium solani	35.69	6.00e-33	135.00
IUUC-Gmo-038887	Gadus morhua	34.90	2.00e-38	153.00
IUUC-Gga-041184	Gallus gallus	42.46	2.00e-47	183.00
IUUC-Gma-043382	Glycine max	70.59	0.00e+00	645.00
IUUC-Hvu-047702	Hordeum vulgare	75.91	0.00e+00	691.00
IUUC-Kpa-049400	Komagataella pastoris	25.93	3.00e-33	135.00
IUUC-Lch-050152	Latimeria chalumnae	39.53	6.00e-47	182.00
IUUC-Lpe-051570	Leersia perrieri	83.73	0.00e+00	723.00
IUUC-Loc-051753	Lepisosteus oculatus	39.33	7.00e-54	204.00
IUUC-Lma-053219	Leptosphaeria maculans	27.72	4.00e-29	122.00
IUUC-Mor-057214	Magnaporthe oryzae	38.55	8.00e-22	98.20
IUUC-Mtr-057954	Medicago truncatula	64.67	0.00e+00	640.00
IUUC-Mla-059020	Melampsora laricipopulina	35.36	8.00e-23	102.00
IUUC-Mga-060176	Meleagris gallopavo	42.16	8.00e-48	184.00
IUUC-Mvi-060278	Microbotryum violaceum	28.22	3.00e-57	216.00
IUUC-Mac-065503	Musa acuminata	61.61	0.00e+00	790.00
IUUC-Mlu-067039	Myotis lucifugus	45.18	4.00e-33	136.00
IUUC-Ncr-068912	Neurospora crassa	34.03	2.00e-31	129.00
IUUC-Ont-072229	Oreochromis niloticus	41.26	2.00e-52	199.00
IUUC-Oba-075659	Oryza barthii	87.86	4.00e-149	520.00
IUUC-Obr-076465	Oryza brachyantha	88.72	0.00e+00	638.00
IUUC-Ogl-077461	Oryza glaberrima	84.69	0.00e+00	757.00
IUUC-Ogu-078515	Oryza glumaepatula	85.69	0.00e+00	752.00
IUUC-Oin-080201	Oryza indica	85.29	0.00e+00	744.00
IUUC-Olo-080751	Oryza longistaminata	87.54	5.00e-148	517.00
IUUC-Ome-081201	Oryza meridionalis	84.10	0.00e+00	760.00
IUUC-Oni-082951	Oryza nivara	85.29	0.00e+00	742.00
IUUC-Opu-083560	Oryza punctata	84.10	0.00e+00	756.00
IUUC-Oru-084440	Oryza rufipogon	85.09	0.00e+00	761.00
IUUC-Osa-085699	Oryza sativa	84.69	0.00e+00	757.00
IUUC-Ola-086705	Oryzias latipes	40.76	5.00e-53	202.00
IUUC-Psi-093166	Pelodiscus sinensis	40.86	9.00e-48	184.00
IUUC-Pno-095106	Phaeosphaeria nodorum	28.20	6.00e-19	88.60
IUUC-Pop-099479	Populus trichocarpa	69.50	4.00e-173	601.00
IUUC-Pca-100776	Procavia capensis	46.90	1.00e-20	94.70
IUUC-Ppe-101595	Prunus persica	62.09	2.00e-175	608.00
IUUC-Pva-102981	Pteropus vampyrus	46.43	2.00e-29	124.00
IUUC-Pgr-103503	Puccinia graminis	30.61	2.00e-33	137.00
IUUC-Ptt-103994	Puccinia triticina	31.36	2.00e-43	170.00
IUUC-Pte-104226	Pyrenophora teres	30.77	1.00e-26	114.00
IUUC-Pyt-104732	Pyrenophora triticirepentis	30.10	3.00e-28	119.00
IUUC-Rno-105225	Rattus norvegicus	48.03	3.00e-33	136.00
IUUC-Sce-106278	Saccharomyces cerevisiae	22.02	3.00e-09	55.10
IUUC-Sha-107353	Sarcophilus harrisii	45.18	4.00e-33	136.00
IUUC-Sja-107876	Schizosaccharomyces japonicus	30.82	2.00e-46	179.00
IUUC-Spo-108266	Schizosaccharomyces pombe	35.15	4.00e-42	165.00
IUUC-Sit-110019	Setaria italica	91.99	0.00e+00	826.00
IUUC-Sar-113166	Sorex araneus	36.21	8.00e-39	155.00
IUUC-Sbi-114746	Sorghum bicolor	90.85	0.00e+00	1118.00
IUUC-Sre-115196	Sporisorium reilianum	29.91	7.00e-40	158.00
IUUC-Tgu-117284	Taeniopygia guttata	42.16	8.00e-48	184.00
IUUC-Tru-118236	Takifugu rubripes	40.59	4.00e-47	182.00
IUUC-Tni-119929	Tetraodon nigroviridis	44.58	5.00e-34	139.00
IUUC-Tca-121156	Theobroma cacao	69.18	2.00e-180	625.00
IUUC-Tre-122179	Trichoderma reesei	37.41	6.00e-36	144.00
IUUC-Tvi-122326	Trichoderma virens	38.10	5.00e-40	158.00
IUUC-Tae-124733	Triticum aestivum	74.91	0.00e+00	931.00
IUUC-Tur-126352	Triticum urartu	80.00	0.00e+00	811.00
IUUC-Tme-126996	Tuber melanosporum	32.00	7.00e-41	161.00
IUUC-Uma-129357	Ustilago maydis	29.00	3.00e-44	173.00
IUUC-Vvi-131734	Vitis vinifera	64.79	2.00e-180	625.00
IUUC-Xtr-132013	Xenopus tropicalis	38.80	2.00e-53	203.00
IUUC-Xma-134244	Xiphophorus maculatus	47.37	2.00e-27	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence