iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114463

UUCD1 version

UUC-SoB-00682

Ensembl Protein ID

Sb04g033820.1

UniProt Accession

A0A194YSH5; A0A194YSH5_SORBI

Genbank Protein ID

KXG31142.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G305000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g033820	Sb04g033820.1	Sb04g033820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	33.0	128	170

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f+d+  + +lp C H+fh dC+  w         + +CP+Cr
   Q: 128  CAVCLSEFEDEerLTLLPkCSHAFHPDCIGEW------LASHVTCPVCR 170
           ********66655555667*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPRHGHALLA ALLASAVAAA SAQPSYDGYG QQEHVSTAMI ALLAAVVAVF VFIAFFTVYL 60
RHCTGYGARS ADGDDRAMRN FDAFISRSRR QRRPRGLDAE VVEAFPTMKY AEAKALRVGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCTCGCC ACGGCCATGC GCTGCTCGCC GCGCTCCTCG CGTCCGCGGT CGCCGCGGCG 60
AGCGCGCAGC CGAGCTACGA TGGCTACGGC CAGCAGGAGC ACGTCAGCAC GGCCATGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014639	Brachypodium distachyon	54.08	4.00e-69	254.00
IUUC-Hvu-047096	Hordeum vulgare	59.10	1.00e-88	319.00
IUUC-Lpe-051304	Leersia perrieri	55.52	1.00e-77	282.00
IUUC-Obr-076795	Oryza brachyantha	62.28	4.00e-74	270.00
IUUC-Ogl-077862	Oryza glaberrima	61.28	1.00e-81	296.00
IUUC-Ogu-078376	Oryza glumaepatula	60.72	6.00e-81	293.00
IUUC-Oin-079432	Oryza indica	61.52	1.00e-81	295.00
IUUC-Olo-080975	Oryza longistaminata	63.57	5.00e-70	256.00
IUUC-Ome-081871	Oryza meridionalis	63.70	5.00e-69	254.00
IUUC-Oni-082727	Oryza nivara	61.52	1.00e-81	295.00
IUUC-Opu-083865	Oryza punctata	61.82	1.00e-82	299.00
IUUC-Oru-084529	Oryza rufipogon	61.28	1.00e-81	296.00
IUUC-Osa-086269	Oryza sativa	61.28	1.00e-81	296.00
IUUC-Sit-110282	Setaria italica	70.26	4.00e-87	314.00
IUUC-Tae-124596	Triticum aestivum	58.41	1.00e-81	296.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence