iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095613

Ensembl Protein ID

PP1S124_89V6.1

UniProt Accession

A9SVH1; A9SVH1_PHYPA

Genbank Protein ID

EDQ64818.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545013

Gene Name

PHYPADRAFT_166784

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S124_89V6	PP1S124_89V6.1	PP1S124_89V6.1
PP1S124_89V6	PP1S124_89V6.2	PP1S124_89V6.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-08	35.5	228	269

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle   dg   ++lpC H+fha C+ +w       +++++CP+C+
   Q: 228  CSVCLEQVVDGeiIRTLPCVHQFHAACIDQW------LKQQATCPVCK 269
           9*****996666699****************......**********7 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSFVFRGARP DLEGGLAGFM PERRSVAGHR FHATGRPVNT NPMAFLITVA LLFMILNSQQ 60
MSQNLMLWIG MGVFLLASSL RMYSICHQLQ SQAQAAAAAA TTGGLLSHTE LRLRMIPTLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACACACGCCC ACTCTCAAGC GCCGGTTTTC TCTACCGCAT CGGCAAGCTT CGTGAAGCTC 60
CCGTGTCCCC TTCGACAAAG TTCCTTTCTT TTCTTCAGGG TTCACACAAC CCTGGTGCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_166784

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000396	Aegilops tauschii	44.41	6.00e-45	174.00
IUUC-Atr-002651	Amborella trichopoda	57.52	8.00e-64	236.00
IUUC-Aly-006305	Arabidopsis lyrata	58.12	2.00e-67	247.00
IUUC-Ath-007026	Arabidopsis thaliana	58.48	2.00e-66	244.00
IUUC-Bdi-015038	Brachypodium distachyon	54.71	5.00e-55	206.00
IUUC-Bol-015365	Brassica oleracea	55.72	2.00e-62	231.00
IUUC-Bra-017904	Brassica rapa	56.09	7.00e-64	236.00
IUUC-Cre-022982	Chlamydomonas reinhardtii	60.00	2.00e-14	72.40
IUUC-Cho-024867	Choloepus hoffmanni	45.61	1.00e-12	67.80
IUUC-Csv-025869	Ciona savignyi	48.89	6.00e-12	65.10
IUUC-Fal-037147	Ficedula albicollis	43.33	4.00e-13	69.70
IUUC-Fso-038141	Fusarium solani	46.97	6.00e-14	71.20
IUUC-Gma-044260	Glycine max	55.60	5.00e-60	223.00
IUUC-Hvu-047764	Hordeum vulgare	55.87	5.00e-51	193.00
IUUC-Lpe-051371	Leersia perrieri	56.63	2.00e-50	191.00
IUUC-Mtr-058078	Medicago truncatula	57.66	2.00e-61	228.00
IUUC-Mac-065081	Musa acuminata	55.96	4.00e-57	213.00
IUUC-Obr-076184	Oryza brachyantha	52.06	1.00e-49	189.00
IUUC-Ogl-076965	Oryza glaberrima	57.39	5.00e-52	196.00
IUUC-Ogu-078414	Oryza glumaepatula	49.30	2.00e-41	161.00
IUUC-Oin-079430	Oryza indica	57.39	2.00e-52	198.00
IUUC-Olo-080739	Oryza longistaminata	57.04	5.00e-52	197.00
IUUC-Ome-081538	Oryza meridionalis	57.39	2.00e-52	198.00
IUUC-Oni-082633	Oryza nivara	57.39	2.00e-52	198.00
IUUC-Opu-084125	Oryza punctata	57.39	7.00e-53	199.00
IUUC-Oru-085061	Oryza rufipogon	49.30	2.00e-41	161.00
IUUC-Osa-086209	Oryza sativa	57.39	2.00e-52	198.00
IUUC-Pop-099435	Populus trichocarpa	57.72	2.00e-66	244.00
IUUC-Ppe-101792	Prunus persica	57.40	1.00e-66	245.00
IUUC-Pva-102879	Pteropus vampyrus	51.06	2.00e-12	67.40
IUUC-Pgr-103602	Puccinia graminis	38.36	4.00e-11	60.50
IUUC-Smo-109389	Selaginella moellendorffii	58.46	1.00e-71	261.00
IUUC-Sit-110587	Setaria italica	61.19	9.00e-11	57.80
IUUC-Sly-111915	Solanum lycopersicum	56.09	3.00e-63	234.00
IUUC-Stu-112568	Solanum tuberosum	50.00	1.00e-49	190.00
IUUC-Sar-113182	Sorex araneus	45.00	3.00e-13	70.10
IUUC-Sbi-113958	Sorghum bicolor	52.69	1.00e-54	206.00
IUUC-Tsy-119210	Tarsius syrichta	51.06	2.00e-12	67.40
IUUC-Tca-121397	Theobroma cacao	56.62	5.00e-69	253.00
IUUC-Tae-125479	Triticum aestivum	57.35	2.00e-52	198.00
IUUC-Tur-125977	Triticum urartu	49.82	2.00e-49	188.00
IUUC-Vvi-131326	Vitis vinifera	57.20	4.00e-60	223.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence