iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114686

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G153900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g013370	Sb01g013370.1	Sb01g013370.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.80e-08	33.5	87	138

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdg.....plvlp.CgHvfhadCl.qkwpglknssskefrCPlCr 46
           Ca+Cl++f        g     ++v++ CgH+fha+C    w       + + +CPlCr
   Q: 87   CALCLSEFassdskA-GgelelVRVVSaCGHFFHAECGvDGW------LRARGTCPLCR 138
           ********8876650.144445666556*********5599*......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSLDAASAIA VAAAVALAVV IVVIVVACGG RTPGRRPGGG GGAAAVHDVE RALGDAATLV 60
TYEQARAAAG KKSGGGSAAD EEEAPRCALC LSEFASSDSK AGGELELVRV VSACGHFFHA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCCTCG ACGCCGCCTC CGCGATCGCG GTCGCGGCGG CGGTGGCCCT CGCGGTGGTC 60
ATCGTGGTCA TCGTTGTCGC CTGCGGCGGA CGGACACCGG GCCGTCGTCC AGGCGGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g013370

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000217	Aegilops tauschii	53.93	4.00e-15	73.20
IUUC-Ogl-077353	Oryza glaberrima	48.91	6.00e-13	66.20
IUUC-Oru-084292	Oryza rufipogon	48.91	6.00e-13	66.20
IUUC-Osa-085815	Oryza sativa	48.91	8.00e-13	65.90
IUUC-Sit-109740	Setaria italica	58.42	2.00e-24	104.00
IUUC-Tae-124612	Triticum aestivum	53.93	4.00e-15	73.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence