iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126741

Ensembl Protein ID

TRIUR3_20878-P1

UniProt Accession

T1MSH5; T1MSH5_TRIUA

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_20878	TRIUR3_20878-T1	TRIUR3_20878-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	3.20e-07	31.0	280	316

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMGFdreealqaLraannnleaAveyLld 40
            + l +lv+MGF+r +a  aL+aa++++++A+e L++
   Q: 280  DEELKKLVAMGFERTQAEVALAAADGDPNVAIEILMS 316
           677999*****************************97 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MRPNIITEVR VPVPSFDFRA GVSTRLNQWW GSTPFITSGL TIICAAIYLV CLLVGYDSYA 60
EICFLPSAVA SHLQVYRFYT SVLFHGSLLH VLFNMLTFVP LGTELERIMG SVRLLFLMFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGCCCCA ACATCATCAC GGAGGTGCGG GTTCCTGTCC CCAGTTTCGA TTTCCGGGTG 60
AATTTCCGCG GGCGCCTTCG GATCTGACAG AAGCTAGCCC CAAATCGCCG CGGGGTTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF01694--Rhomboid
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004252--F:serine-type endopeptidase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003104	Amborella trichopoda	68.02	4.00e-70	258.00
IUUC-Aly-006262	Arabidopsis lyrata	65.43	1.00e-62	232.00
IUUC-Ath-006650	Arabidopsis thaliana	67.46	3.00e-61	228.00
IUUC-Bci-013845	Botrytis cinerea	26.13	8.30e-02	29.60
IUUC-Bdi-014166	Brachypodium distachyon	57.23	4.00e-93	333.00
IUUC-Bol-015488	Brassica oleracea	65.34	1.00e-69	256.00
IUUC-Bra-017302	Brassica rapa	64.36	3.00e-72	264.00
IUUC-Cre-022648	Chlamydomonas reinhardtii	38.79	1.00e-29	122.00
IUUC-Cme-027293	Cyanidioschyzon merolae	27.33	1.00e-11	63.50
IUUC-Gma-042948	Glycine max	67.20	2.00e-75	275.00
IUUC-Hvu-047778	Hordeum vulgare	60.23	6.00e-104	369.00
IUUC-Itr-048333	Ictidomys tridecemlineatus	25.23	9.20e-02	30.00
IUUC-Lch-049560	Latimeria chalumnae	30.00	4.00e-04	38.10
IUUC-Lpe-051525	Leersia perrieri	56.70	5.00e-94	337.00
IUUC-Mtr-058025	Medicago truncatula	68.78	1.00e-75	276.00
IUUC-Mac-064802	Musa acuminata	51.81	8.00e-76	276.00
IUUC-Oba-075871	Oryza barthii	63.84	5.00e-80	290.00
IUUC-Obr-076568	Oryza brachyantha	57.67	9.00e-93	332.00
IUUC-Ogl-077534	Oryza glaberrima	65.57	4.00e-85	306.00
IUUC-Ogu-078204	Oryza glumaepatula	63.47	7.00e-80	290.00
IUUC-Oin-079209	Oryza indica	65.57	4.00e-85	306.00
IUUC-Olo-080827	Oryza longistaminata	95.00	1.00e-17	82.40
IUUC-Oni-082642	Oryza nivara	61.09	1.00e-77	282.00
IUUC-Opu-083685	Oryza punctata	61.45	7.00e-85	306.00
IUUC-Oru-085021	Oryza rufipogon	61.09	2.00e-77	282.00
IUUC-Osa-086297	Oryza sativa	65.57	4.00e-85	306.00
IUUC-Olu-087599	Ostreococcus lucimarinus	28.85	2.00e-17	82.00
IUUC-Pma-094508	Petromyzon marinus	34.55	1.90e-01	30.40
IUUC-Ppa-095438	Physcomitrella patens	54.60	1.00e-58	219.00
IUUC-Pfo-097368	Poecilia formosa	33.33	7.00e-03	34.70
IUUC-Pop-099200	Populus trichocarpa	67.86	1.00e-69	256.00
IUUC-Ppe-101907	Prunus persica	69.23	1.00e-70	259.00
IUUC-Pyt-104450	Pyrenophora triticirepentis	47.37	7.00e-04	37.40
IUUC-Ssl-108652	Sclerotinia sclerotiorum	26.13	8.10e-02	30.00
IUUC-Smo-109633	Selaginella moellendorffii	54.21	4.00e-58	217.00
IUUC-Sit-110586	Setaria italica	55.33	2.00e-91	328.00
IUUC-Sly-111682	Solanum lycopersicum	64.21	1.00e-63	236.00
IUUC-Stu-112146	Solanum tuberosum	63.68	2.00e-61	228.00
IUUC-Sbi-114385	Sorghum bicolor	57.01	2.00e-91	328.00
IUUC-Ssc-115544	Sus scrofa	25.23	9.00e-03	33.50
IUUC-Tca-120985	Theobroma cacao	62.39	3.00e-76	277.00
IUUC-Tae-125293	Triticum aestivum	62.43	1.00e-105	375.00
IUUC-Vvi-131200	Vitis vinifera	64.80	8.00e-74	270.00
IUUC-Yli-134620	Yarrowia lipolytica	24.62	5.00e-05	40.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence