iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014454

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000884

Gene Name

LOC100845749; BRADI_5g09777

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI5G09777	BRADI5G09777.1	BRADI5G09777.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.80e-32	110.2	22	93

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           ++p++f+CpIsl++Mr Pv l++G+tydr+sI++wl+sg++tcP t+ pl ++dlvPnltlr+li +w ++ 
   Q: 22   KIPSFFRCPISLDVMRSPVSLCTGVTYDRASIQRWLDSGHTTCPATMLPLPSTDLVPNLTLRSLIAHWSASA 93
           58******************************************************************9875 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MVRKETSTSM RLPPQHQGLE VKIPSFFRCP ISLDVMRSPV SLCTGVTYDR ASIQRWLDSG 60
HTTCPATMLP LPSTDLVPNL TLRSLIAHWS ASAASCSPAA AGSVAFFAAG PSPAGLVRQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCCCCTTT CTGCTGCATT CCCTGCTCCA CAAGGAAAAG GATTGCTAGC CTAGGAGCCA 60
TGGTGAGGAA GGAGACGAGC ACGAGCATGA GGCTCCCGCC TCAGCACCAG GGGCTGGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100845749

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047178	Hordeum vulgare	92.31	3.00e-64	235.00
IUUC-Lpe-050910	Leersia perrieri	75.35	6.00e-79	286.00
IUUC-Mac-064700	Musa acuminata	48.62	3.00e-80	291.00
IUUC-Obr-076177	Oryza brachyantha	84.71	1.00e-77	281.00
IUUC-Ogl-077051	Oryza glaberrima	76.31	1.00e-126	445.00
IUUC-Olo-080672	Oryza longistaminata	79.59	3.00e-64	237.00
IUUC-Oni-082297	Oryza nivara	75.33	4.00e-129	454.00
IUUC-Opu-083968	Oryza punctata	82.41	3.00e-147	514.00
IUUC-Oru-084478	Oryza rufipogon	72.67	2.00e-130	458.00
IUUC-Osa-085354	Oryza sativa	76.99	4.00e-130	457.00
IUUC-Sit-110583	Setaria italica	79.91	3.00e-152	530.00
IUUC-Sbi-114135	Sorghum bicolor	69.82	3.00e-115	407.00
IUUC-Tae-124143	Triticum aestivum	87.02	2.00e-162	564.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence