iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027962

Ensembl Protein ID

ENSDARP00000018901.6

UniProt Accession

Q7ZVV4; Q7ZVV4_DANRE

Genbank Protein ID

AAH45397.1

Protein Name

General transcription factor IIH, polypeptide 2

Genbank Nucleotide ID

BX510923

Gene Name

gtf2h2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000016514.6	ENSDART00000007587.6	ENSDARP00000018901.6

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	39.13	1.00e-79	291.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Danio rerio

Protein Sequence
(Fasta)

MDEEPERTKR WEGGYERTWE VLKEDESGSL KATVEDILFQ AKRKRVFESH GQVRLGMMRH 60
LFVIIDSSRS MEDQDLKPNR LTSTLKLMEH FVEEYFDQNP ISQIGIITTK NKRAEKLTDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTACAAAAGA TGCACTAAAG TAAATACCGG TGAATCGCGT TGTTTTTGTA GTAGGCTACT 60
AACATGTAGT AGGCTACGTA TTAGTATTTC ATTACTAAAA AATCCAGTTT ATATGCATGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A
IPR013087--Znf_C2H2_type
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50234--VWFA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4
SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005675--C:holo TFIIH complex
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

KEGG

dre:323239

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	37.38	2.00e-49	189.00
IUUC-Aml-002041	Ailuropoda melanoleuca	81.63	0.00e+00	651.00
IUUC-Atr-003056	Amborella trichopoda	44.72	7.00e-74	270.00
IUUC-Apl-003464	Anas platyrhynchos	76.99	6.00e-165	573.00
IUUC-Aca-004745	Anolis carolinensis	82.35	0.00e+00	630.00
IUUC-Aly-005559	Arabidopsis lyrata	42.09	6.00e-83	301.00
IUUC-Ath-007556	Arabidopsis thaliana	42.09	9.00e-83	300.00
IUUC-Ago-007851	Ashbya gossypii	37.85	1.00e-79	290.00
IUUC-Acl-008100	Aspergillus clavatus	40.20	2.00e-80	293.00
IUUC-Afl-008649	Aspergillus flavus	41.46	9.00e-13	64.70
IUUC-Afu-009066	Aspergillus fumigatus	39.76	2.00e-81	296.00
IUUC-Ani-009372	Aspergillus nidulans	39.61	6.00e-78	284.00
IUUC-Ang-009726	Aspergillus niger	39.85	1.00e-83	303.00
IUUC-Aor-010135	Aspergillus oryzae	39.90	6.00e-79	288.00
IUUC-Ate-010399	Aspergillus terreus	39.02	1.00e-26	112.00
IUUC-Ame-011618	Astyanax mexicanus	88.30	0.00e+00	735.00
IUUC-Bgr-012154	Blumeria graminis	37.28	7.00e-78	284.00
IUUC-Bta-012353	Bos taurus	82.17	0.00e+00	668.00
IUUC-Bci-013932	Botrytis cinerea	36.59	7.00e-79	288.00
IUUC-Bdi-014391	Brachypodium distachyon	40.36	3.00e-77	282.00
IUUC-Bol-015128	Brassica oleracea	42.07	1.00e-83	303.00
IUUC-Bra-017932	Brassica rapa	42.00	1.00e-83	303.00
IUUC-Cel-018649	Caenorhabditis elegans	41.13	2.00e-83	303.00
IUUC-Cja-018776	Callithrix jacchus	81.91	0.00e+00	644.00
IUUC-Cfa-020584	Canis familiaris	81.89	0.00e+00	650.00
IUUC-Cpo-021300	Cavia porcellus	82.95	0.00e+00	653.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	40.63	6.00e-74	271.00
IUUC-Csa-024092	Chlorocebus sabaeus	82.69	0.00e+00	652.00
IUUC-Cho-024919	Choloepus hoffmanni	78.18	1.00e-91	328.00
IUUC-Cin-025386	Ciona intestinalis	51.26	2.00e-110	392.00
IUUC-Csv-026295	Ciona savignyi	48.85	2.00e-104	372.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	33.25	2.00e-66	246.00
IUUC-Cne-026956	Cryptococcus neoformans	35.78	6.00e-77	281.00
IUUC-Cme-027150	Cyanidioschyzon merolae	29.28	1.00e-45	177.00
IUUC-Dno-029979	Dasypus novemcinctus	79.66	1.00e-156	545.00
IUUC-Dse-031405	Dothistroma septosporum	35.10	7.00e-67	248.00
IUUC-Dme-031710	Drosophila melanogaster	50.00	7.00e-111	394.00
IUUC-Ete-032631	Echinops telfairi	76.74	7.00e-177	613.00
IUUC-Eca-034054	Equus caballus	82.17	0.00e+00	653.00
IUUC-Fca-035724	Felis catus	77.81	3.00e-180	624.00
IUUC-Fal-036987	Ficedula albicollis	79.07	0.00e+00	679.00
IUUC-Fox-037692	Fusarium oxysporum	35.90	1.00e-72	267.00
IUUC-Fso-038442	Fusarium solani	37.05	4.00e-73	268.00
IUUC-Gmo-039273	Gadus morhua	81.91	0.00e+00	682.00
IUUC-Ggr-040009	Gaeumannomyces graminis	34.22	1.00e-57	217.00
IUUC-Gga-041089	Gallus gallus	78.81	0.00e+00	681.00
IUUC-Gac-041978	Gasterosteus aculeatus	83.20	0.00e+00	663.00
IUUC-Gma-043371	Glycine max	41.98	3.00e-88	318.00
IUUC-Hsa-046001	Homo sapiens	82.17	0.00e+00	649.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	81.91	0.00e+00	674.00
IUUC-Kpa-049235	Komagataella pastoris	40.59	1.00e-75	276.00
IUUC-Lch-049926	Latimeria chalumnae	81.14	0.00e+00	664.00
IUUC-Lpe-051352	Leersia perrieri	40.25	4.00e-75	275.00
IUUC-Loc-051987	Lepisosteus oculatus	85.01	0.00e+00	707.00
IUUC-Lma-053171	Leptosphaeria maculans	32.39	3.00e-59	223.00
IUUC-Laf-054372	Loxodonta africana	82.95	0.00e+00	675.00
IUUC-Mcc-055108	Macaca mulatta	82.69	0.00e+00	653.00
IUUC-Mor-056990	Magnaporthe oryzae	34.99	1.00e-71	263.00
IUUC-Mtr-058401	Medicago truncatula	40.95	2.00e-86	313.00
IUUC-Mla-059186	Melampsora laricipopulina	40.54	4.00e-84	305.00
IUUC-Mvi-060262	Microbotryum violaceum	36.88	4.00e-82	298.00
IUUC-Mmr-061688	Microcebus murinus	75.26	5.00e-171	593.00
IUUC-Mdo-062154	Monodelphis domestica	81.65	0.00e+00	670.00
IUUC-Mmu-064232	Mus musculus	81.96	0.00e+00	644.00
IUUC-Mac-065091	Musa acuminata	41.32	2.00e-80	293.00
IUUC-Mpu-066747	Mustela putorius furo	76.53	4.00e-170	590.00
IUUC-Mlu-067799	Myotis lucifugus	76.03	8.00e-167	579.00
IUUC-Nfi-068371	Neosartorya fischeri	33.97	7.00e-19	86.70
IUUC-Ncr-068704	Neurospora crassa	33.95	7.00e-68	251.00
IUUC-Nle-069054	Nomascus leucogenys	81.91	0.00e+00	645.00
IUUC-Ont-071624	Oreochromis niloticus	85.23	0.00e+00	687.00
IUUC-Oan-072898	Ornithorhynchus anatinus	81.59	0.00e+00	670.00
IUUC-Ocu-074289	Oryctolagus cuniculus	85.16	3.00e-157	547.00
IUUC-Oba-075985	Oryza barthii	39.59	1.00e-73	270.00
IUUC-Obr-076887	Oryza brachyantha	39.75	8.00e-76	277.00
IUUC-Ogl-077823	Oryza glaberrima	39.59	1.00e-73	270.00
IUUC-Ogu-078412	Oryza glumaepatula	42.04	9.00e-68	251.00
IUUC-Oin-079569	Oryza indica	38.54	7.00e-52	198.00
IUUC-Olo-080249	Oryza longistaminata	38.41	1.00e-50	194.00
IUUC-Ome-081240	Oryza meridionalis	42.04	3.00e-68	253.00
IUUC-Oni-082152	Oryza nivara	42.04	2.00e-67	250.00
IUUC-Opu-084011	Oryza punctata	40.10	2.00e-73	269.00
IUUC-Oru-084719	Oryza rufipogon	42.04	9.00e-68	251.00
IUUC-Osa-085286	Oryza sativa	39.85	7.00e-75	275.00
IUUC-Ola-086525	Oryzias latipes	70.18	4.00e-160	557.00
IUUC-Olu-087876	Ostreococcus lucimarinus	40.72	1.00e-70	260.00
IUUC-Oga-088125	Otolemur garnettii	80.92	0.00e+00	661.00
IUUC-Oar-089701	Ovis aries	82.43	0.00e+00	669.00
IUUC-Ptr-091218	Pan troglodytes	82.43	0.00e+00	652.00
IUUC-Pan-091755	Papio anubis	82.69	0.00e+00	653.00
IUUC-Psi-094061	Pelodiscus sinensis	81.40	0.00e+00	674.00
IUUC-Pma-094430	Petromyzon marinus	78.26	8.00e-121	426.00
IUUC-Pno-094900	Phaeosphaeria nodorum	30.45	1.00e-23	105.00
IUUC-Ppa-095895	Physcomitrella patens	42.41	4.00e-85	308.00
IUUC-Pfo-096297	Poecilia formosa	86.17	2.00e-132	464.00
IUUC-Pab-097717	Pongo abelii	82.69	0.00e+00	653.00
IUUC-Pop-098938	Populus trichocarpa	42.27	1.00e-82	300.00
IUUC-Pca-100389	Procavia capensis	74.56	9.00e-149	519.00
IUUC-Ppe-102045	Prunus persica	41.03	5.00e-81	295.00
IUUC-Pva-102357	Pteropus vampyrus	78.00	1.00e-82	298.00
IUUC-Pgr-103399	Puccinia graminis	43.87	8.00e-92	330.00
IUUC-Ptt-103872	Puccinia triticina	43.63	9.00e-92	330.00
IUUC-Pte-104092	Pyrenophora teres	34.32	7.00e-54	204.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	34.32	2.00e-54	206.00
IUUC-Rno-105515	Rattus norvegicus	82.22	0.00e+00	667.00
IUUC-Sce-106434	Saccharomyces cerevisiae	39.13	5.00e-80	291.00
IUUC-Sha-106808	Sarcophilus harrisii	81.91	0.00e+00	670.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	41.22	4.00e-80	291.00
IUUC-Spo-108044	Schizosaccharomyces pombe	39.80	3.00e-82	299.00
IUUC-Smo-109581	Selaginella moellendorffii	41.96	9.00e-84	303.00
IUUC-Sit-110704	Setaria italica	40.31	3.00e-77	282.00
IUUC-Sly-110990	Solanum lycopersicum	43.83	3.00e-69	255.00
IUUC-Stu-112542	Solanum tuberosum	42.92	9.00e-47	180.00
IUUC-Sar-113766	Sorex araneus	83.28	1.00e-157	548.00
IUUC-Sbi-114016	Sorghum bicolor	40.56	3.00e-75	275.00
IUUC-Sre-115099	Sporisorium reilianum	38.21	1.00e-81	296.00
IUUC-Ssc-115277	Sus scrofa	82.43	0.00e+00	639.00
IUUC-Tgu-117343	Taeniopygia guttata	78.76	0.00e+00	670.00
IUUC-Tru-118397	Takifugu rubripes	81.91	0.00e+00	655.00
IUUC-Tni-120272	Tetraodon nigroviridis	82.01	0.00e+00	655.00
IUUC-Tca-121514	Theobroma cacao	43.29	3.00e-90	325.00
IUUC-Tre-121990	Trichoderma reesei	36.50	2.00e-69	256.00
IUUC-Tvi-122504	Trichoderma virens	37.78	9.00e-68	250.00
IUUC-Tae-123153	Triticum aestivum	40.36	1.00e-75	276.00
IUUC-Tur-126693	Triticum urartu	45.59	2.00e-62	232.00
IUUC-Tme-127011	Tuber melanosporum	39.16	2.00e-76	280.00
IUUC-Tbe-127939	Tupaia belangeri	82.43	0.00e+00	648.00
IUUC-Ttr-128889	Tursiops truncatus	74.94	5.00e-172	597.00
IUUC-Uma-129450	Ustilago maydis	37.62	4.00e-80	292.00
IUUC-Vda-129919	Verticillium dahliae	35.19	1.00e-63	237.00
IUUC-Vvi-130928	Vitis vinifera	42.89	1.00e-86	313.00
IUUC-Xtr-131891	Xenopus tropicalis	69.72	1.00e-165	575.00
IUUC-Xma-133260	Xiphophorus maculatus	85.38	1.00e-131	462.00
IUUC-Yli-134578	Yarrowia lipolytica	38.79	8.00e-77	281.00
IUUC-Zma-135427	Zea mays	40.82	1.00e-76	280.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence