iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099944

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_263506; POPTR_0001s41200g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s41200	POPTR_0001s41200.1	POPTR_0001s41200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.40e-07	30.1	40	102
E3 activity/RING/RING	6.90e-09	37.2	43	91

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk.........tcPvtrqplteedlvPn 58
           +f C I l+  +dPvv+ +G+ y   +I kwl  + +         +cPv+++ +++++lvP 
   Q: 40   YFECNICLDSAHDPVVTLCGHLYCWPCIYKWLHVKTSspdasqqqpSCPVCKADISPNSLVPL 102
           89******************************44444456777789***************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           C iCl++  d p+v+ CgH+++  C++kw      +++ s+++ +CP+C+
   Q: 43   CNICLDSAHD-PVVTLCGHLYCWPCIYKWlhvkTSSPDASQQQPSCPVCK 91
           99********.9999*****************9999999**********7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEQHFFDHEA HFESEEDVGL KQKHKLIPVP TAVSDNDSGY FECNICLDSA HDPVVTLCGH 60
LYCWPCIYKW LHVKTSSPDA SQQQPSCPVC KADISPNSLV PLYGRGPSTS ESKSKKDPVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCCTCCTC TCTCTCAACA ATTTCACATC TCTCATCTCA AGAAAATAAA AAGATTTGGT 60
CTTTCTGCGT TAAAGTTTCT AAGCCTATTT TCTGTTTCTT CTGATCCAGC CTTCTCGTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s41200g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000767	Aegilops tauschii	37.18	1.00e-30	125.00
IUUC-Aly-006090	Arabidopsis lyrata	48.58	6.00e-55	206.00
IUUC-Ath-006841	Arabidopsis thaliana	48.18	1.00e-54	205.00
IUUC-Bdi-014949	Brachypodium distachyon	38.57	3.00e-28	117.00
IUUC-Bol-015969	Brassica oleracea	44.67	3.00e-49	187.00
IUUC-Bra-016747	Brassica rapa	45.78	5.00e-50	190.00
IUUC-Gma-044283	Glycine max	52.32	7.00e-62	229.00
IUUC-Hvu-047276	Hordeum vulgare	38.29	5.00e-32	130.00
IUUC-Kpa-049242	Komagataella pastoris	43.08	2.00e-09	55.10
IUUC-Ogl-077734	Oryza glaberrima	37.50	6.00e-25	107.00
IUUC-Ogu-078280	Oryza glumaepatula	37.50	6.00e-25	107.00
IUUC-Oin-079906	Oryza indica	37.50	6.00e-25	107.00
IUUC-Olo-081070	Oryza longistaminata	37.50	6.00e-25	107.00
IUUC-Ome-081915	Oryza meridionalis	37.50	5.00e-25	107.00
IUUC-Oni-082950	Oryza nivara	37.50	6.00e-25	107.00
IUUC-Osa-085904	Oryza sativa	37.50	6.00e-25	107.00
IUUC-Ppe-101279	Prunus persica	45.98	1.00e-46	179.00
IUUC-Sly-110881	Solanum lycopersicum	50.85	2.00e-60	225.00
IUUC-Stu-112089	Solanum tuberosum	50.60	1.00e-60	225.00
IUUC-Sbi-114178	Sorghum bicolor	37.89	8.00e-35	139.00
IUUC-Tca-121161	Theobroma cacao	62.60	1.00e-76	278.00
IUUC-Tae-123926	Triticum aestivum	39.29	5.00e-34	137.00
IUUC-Tur-126644	Triticum urartu	37.67	1.00e-28	120.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence