iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112358

Ensembl Protein ID

PGSC0003DMT400062948

UniProt Accession

M1C9U3; M1C9U3_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400024497	PGSC0003DMT400062948	PGSC0003DMT400062948
PGSC0003DMG400024497	PGSC0003DMT400062949	PGSC0003DMT400062949

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-07	33.6	245	286

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+f   ++++ lpC H fh  C+  w       + + +CP Cr
   Q: 245  CPICLEEFdvGNEVRGLPCAHNFHVACIDEW------LRLNVKCPRCR 286
           ********88566******************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAMRGVDFKW YDGFFLSMLA TSMYPFKRFP PKKIIVAINW KRYHLCIYPL HIWIVVDYTT 60
VFVFRLLMFV DNGLAAGMGL DFGWQQRYGR FCGRIAVLSV LALLLYPFLW AWTIIGTLWF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATGA GAGGAGTTGA TTTTAAATGG TAACTCTTCT TATCTTTTAT CTTTCTTGGT 60
TTTTTCTTTA CCGTTGAGTT ATCAAATTTT AATTTTTTTG AGTTTTTTCT TCTTGTAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000667	Aegilops tauschii	80.44	4.00e-150	524.00
IUUC-Atr-002648	Amborella trichopoda	75.35	1.00e-153	534.00
IUUC-Aly-006490	Arabidopsis lyrata	73.31	7.00e-152	528.00
IUUC-Ath-007655	Arabidopsis thaliana	72.75	8.00e-152	528.00
IUUC-Bol-015136	Brassica oleracea	72.83	1.00e-150	524.00
IUUC-Fca-035950	Felis catus	29.78	1.00e-14	72.40
IUUC-Gma-042879	Glycine max	80.39	1.00e-172	598.00
IUUC-Hvu-047589	Hordeum vulgare	81.53	2.00e-68	249.00
IUUC-Lpe-051403	Leersia perrieri	63.26	3.00e-104	369.00
IUUC-Mtr-058746	Medicago truncatula	81.49	8.00e-176	608.00
IUUC-Mac-064833	Musa acuminata	81.01	3.00e-165	573.00
IUUC-Oba-075099	Oryza barthii	79.34	3.00e-152	530.00
IUUC-Obr-076541	Oryza brachyantha	73.16	6.00e-153	532.00
IUUC-Ogl-077544	Oryza glaberrima	79.64	4.00e-152	529.00
IUUC-Ogu-078123	Oryza glumaepatula	75.15	7.00e-139	485.00
IUUC-Olo-080383	Oryza longistaminata	58.28	3.00e-95	340.00
IUUC-Ome-081106	Oryza meridionalis	69.64	1.00e-117	414.00
IUUC-Oni-082730	Oryza nivara	79.82	1.00e-155	541.00
IUUC-Opu-083224	Oryza punctata	79.28	3.00e-152	530.00
IUUC-Oru-085150	Oryza rufipogon	81.02	9.00e-127	445.00
IUUC-Osa-085392	Oryza sativa	79.70	6.00e-150	522.00
IUUC-Pop-099421	Populus trichocarpa	77.96	6.00e-158	548.00
IUUC-Ppe-101399	Prunus persica	77.57	7.00e-145	505.00
IUUC-Sit-109685	Setaria italica	75.68	5.00e-154	536.00
IUUC-Sly-111730	Solanum lycopersicum	95.09	0.00e+00	709.00
IUUC-Sbi-114646	Sorghum bicolor	75.48	3.00e-153	533.00
IUUC-Tca-121643	Theobroma cacao	80.97	3.00e-176	609.00
IUUC-Tur-126639	Triticum urartu	81.71	6.00e-123	433.00
IUUC-Vvi-131627	Vitis vinifera	73.54	3.00e-163	566.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence