iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134581

Ensembl Protein ID

CAG79465

UniProt Accession

Q6C640; Q6C640_YARLI

Genbank Protein ID

CAG79465.1

Protein Name

YALI0E12639p

Genbank Nucleotide ID

CR382131

Gene Name

YALI0_E12639g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_E12639g	CAG79465	CAG79465

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.80e-07	28.9	27	75
E3 activity/RING/RING	3.80e-06	25.8	32	70

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplte 52
            +   C +  elM+ P+vl++G++y   +I  w+ + ++ cP +r++ ++
   Q: 27   ADSVTCIVCQELMCLPCVLECGHSYCYDCISTWFTKVNT-CPSCRKECHK 75
           667789999*****************************9.*****98765 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+e ++  p+vl CgH ++ dC+  w        k  +CP Cr
   Q: 32   CIVCQELMCL-PCVLECGHSYCYDCISTW------FTKVNTCPSCR 70
           ****999988.******************......9*********8 PP

Organism

Yarrowia lipolytica

Protein Sequence
(Fasta)

MSDNLNVTAL SRAYTQTQCV SLLSQVADSV TCIVCQELMC LPCVLECGHS YCYDCISTWF 60
TKVNTCPSCR KECHKKPHIS HAAAGISKAI IAAIIETDPS RKAEYDELMQ RQTEEYKRDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCGACA ACTTAAACGT GACAGCGTTG AGTAGGGCCT ATGTGAGTAC ACCGGCACCG 60
CTAGCAGCTA CGTCTGGATA TCGGATCTAA CTAACACAGA CTCAAACACA ATGTGTGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

yli:YALI0E12639g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005949	Arabidopsis lyrata	41.54	9.00e-10	55.80
IUUC-Ath-007582	Arabidopsis thaliana	41.54	2.00e-09	55.10
IUUC-Bdi-014546	Brachypodium distachyon	41.54	8.00e-10	56.20
IUUC-Bol-015956	Brassica oleracea	51.28	2.00e-09	55.10
IUUC-Bra-016928	Brassica rapa	51.28	2.00e-09	55.10
IUUC-Cel-018573	Caenorhabditis elegans	40.00	4.00e-07	50.10
IUUC-Cho-024857	Choloepus hoffmanni	39.22	1.00e-06	47.00
IUUC-Dre-027704	Danio rerio	33.87	9.00e-08	49.70
IUUC-Dno-029175	Dasypus novemcinctus	39.29	4.00e-08	49.70
IUUC-Dor-030142	Dipodomys ordii	39.22	3.00e-07	48.50
IUUC-Dme-031681	Drosophila melanogaster	41.18	3.00e-10	58.20
IUUC-Gmo-038833	Gadus morhua	42.86	5.00e-08	50.40
IUUC-Gma-043596	Glycine max	43.08	1.00e-09	55.50
IUUC-Hvu-047068	Hordeum vulgare	45.83	7.00e-12	60.10
IUUC-Lpe-051314	Leersia perrieri	43.08	9.00e-10	56.20
IUUC-Loc-052279	Lepisosteus oculatus	38.89	2.00e-07	48.90
IUUC-Laf-053529	Loxodonta africana	39.22	6.00e-07	47.80
IUUC-Meu-056771	Macropus eugenii	44.74	1.00e-04	39.30
IUUC-Mtr-058255	Medicago truncatula	43.08	1.00e-09	55.50
IUUC-Mdo-062616	Monodelphis domestica	43.75	7.00e-08	48.50
IUUC-Mmu-063738	Mus musculus	42.31	2.00e-07	49.30
IUUC-Mac-065025	Musa acuminata	46.67	9.00e-10	55.80
IUUC-Ont-072259	Oreochromis niloticus	48.00	9.00e-08	49.70
IUUC-Oba-075293	Oryza barthii	46.67	2.00e-09	53.50
IUUC-Obr-076737	Oryza brachyantha	43.08	1.00e-09	54.30
IUUC-Ogl-077068	Oryza glaberrima	43.08	1.00e-09	55.80
IUUC-Ogu-078321	Oryza glumaepatula	43.08	9.00e-10	56.20
IUUC-Oin-079122	Oryza indica	43.08	8.00e-10	56.20
IUUC-Ome-081614	Oryza meridionalis	46.67	2.00e-09	55.10
IUUC-Oni-082296	Oryza nivara	43.08	8.00e-10	56.20
IUUC-Opu-083546	Oryza punctata	43.08	2.00e-09	55.50
IUUC-Oru-084510	Oryza rufipogon	43.08	1.00e-09	55.80
IUUC-Osa-085495	Oryza sativa	43.08	1.00e-09	55.80
IUUC-Ola-087166	Oryzias latipes	43.10	8.00e-08	50.10
IUUC-Ppa-095990	Physcomitrella patens	41.54	6.00e-09	53.10
IUUC-Pfo-096858	Poecilia formosa	43.10	1.00e-08	52.80
IUUC-Pop-098860	Populus trichocarpa	51.28	5.00e-09	53.50
IUUC-Ppe-101974	Prunus persica	42.42	3.00e-10	57.40
IUUC-Sha-106717	Sarcophilus harrisii	43.75	7.00e-08	48.50
IUUC-Sit-110120	Setaria italica	51.28	1.00e-09	55.80
IUUC-Sly-111873	Solanum lycopersicum	51.28	2.00e-09	55.10
IUUC-Stu-112302	Solanum tuberosum	41.54	2.00e-09	54.70
IUUC-Sbi-114889	Sorghum bicolor	43.08	6.00e-10	56.60
IUUC-Ssc-115925	Sus scrofa	43.48	7.00e-08	49.70
IUUC-Tgu-116998	Taeniopygia guttata	31.67	7.00e-07	46.60
IUUC-Tru-118630	Takifugu rubripes	44.64	2.00e-08	52.00
IUUC-Tni-120295	Tetraodon nigroviridis	47.92	2.00e-07	48.10
IUUC-Tca-121155	Theobroma cacao	43.08	2.00e-10	58.50
IUUC-Tae-124618	Triticum aestivum	51.28	2.00e-09	55.10
IUUC-Tur-126148	Triticum urartu	45.83	5.00e-10	56.60
IUUC-Ttr-128972	Tursiops truncatus	36.36	3.00e-08	50.10
IUUC-Vvi-131323	Vitis vinifera	41.54	9.00e-10	56.20
IUUC-Xtr-132923	Xenopus tropicalis	40.91	3.00e-08	50.80
IUUC-Xma-134182	Xiphophorus maculatus	43.33	9.00e-09	52.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence