iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131545

UUCD1 version

UUC-ViV-00465

Ensembl Protein ID

VIT_08s0058g01100.t01

UniProt Accession

F6GXX9; F6GXX9_VITVI

Genbank Protein ID

CCB44780.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN594967

Gene Name

VIT_08s0058g01100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0058g01100	VIT_08s0058g01100.t01	VIT_08s0058g01100.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.70e-30	104.0	268	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpI+l+lMrdPvv+++G+tydr+sI +w++sg++ cP+t+q l++++l+ n +lr+li  wc e+++
   Q: 268  IPADFRCPITLDLMRDPVVVATGQTYDRTSINRWIESGHNMCPKTGQILAHTNLIQNRALRNLIILWCREQEI 340
           79******************************************************************99875 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAISPQNFPR KRRPSAGSFI SPTLSDRRLV QSLLLVSQEI SSLAPLQFLL KRNSVSIIRK 60
SNLLAFLFEE LLRNPVSCFA PTAILCFEEM YIVLQRMKTL IEDCSNGSRT WLLMQNESVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGACCCAAT AAACAAATTT GCAGTTGAAT TGAACTGCTC AATTTTAGGC ATTGAAGGAA 60
AACAGGACCT CAATTCTTAC CCAGTAAAAG GCCAGCCAAA TAGAAAAACC AACTCTTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

KEGG

vvi:100256780

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000493	Aegilops tauschii	48.38	1.00e-77	282.00
IUUC-Atr-002566	Amborella trichopoda	48.36	5.00e-144	504.00
IUUC-Aly-005828	Arabidopsis lyrata	60.83	0.00e+00	683.00
IUUC-Ath-007101	Arabidopsis thaliana	61.05	0.00e+00	682.00
IUUC-Bdi-014833	Brachypodium distachyon	46.61	4.00e-107	381.00
IUUC-Bol-015511	Brassica oleracea	60.06	0.00e+00	697.00
IUUC-Bra-017197	Brassica rapa	60.06	0.00e+00	695.00
IUUC-Gma-043531	Glycine max	59.20	1.00e-179	622.00
IUUC-Hvu-047557	Hordeum vulgare	45.99	3.00e-116	411.00
IUUC-Lpe-051445	Leersia perrieri	46.52	2.00e-109	389.00
IUUC-Mtr-058241	Medicago truncatula	61.48	0.00e+00	628.00
IUUC-Mac-065033	Musa acuminata	48.32	1.00e-130	459.00
IUUC-Oba-075591	Oryza barthii	46.82	3.00e-117	414.00
IUUC-Obr-076747	Oryza brachyantha	50.56	1.00e-110	392.00
IUUC-Ogl-077709	Oryza glaberrima	46.82	3.00e-117	414.00
IUUC-Ogu-078626	Oryza glumaepatula	46.82	4.00e-117	414.00
IUUC-Oin-080113	Oryza indica	46.64	6.00e-117	414.00
IUUC-Olo-080301	Oryza longistaminata	43.64	7.00e-72	263.00
IUUC-Ome-081924	Oryza meridionalis	47.12	4.00e-119	421.00
IUUC-Oni-082284	Oryza nivara	46.82	4.00e-117	414.00
IUUC-Opu-083971	Oryza punctata	46.70	5.00e-116	410.00
IUUC-Oru-084898	Oryza rufipogon	46.64	7.00e-121	427.00
IUUC-Osa-085986	Oryza sativa	47.34	3.00e-120	424.00
IUUC-Pop-099292	Populus trichocarpa	67.22	0.00e+00	840.00
IUUC-Ppe-101643	Prunus persica	67.62	0.00e+00	844.00
IUUC-Sit-110652	Setaria italica	45.34	1.00e-121	429.00
IUUC-Sly-111346	Solanum lycopersicum	66.47	0.00e+00	835.00
IUUC-Stu-112435	Solanum tuberosum	66.81	0.00e+00	800.00
IUUC-Sbi-114567	Sorghum bicolor	44.65	9.00e-111	393.00
IUUC-Tca-121203	Theobroma cacao	70.65	0.00e+00	861.00
IUUC-Tae-124205	Triticum aestivum	45.86	6.00e-110	390.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence