iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131066

UUCD1 version

UUC-ViV-01127

Ensembl Protein ID

VIT_06s0009g00890.t01

UniProt Accession

F6HAA6; F6HAA6_VITVI

Genbank Protein ID

CCB49185.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595504

Gene Name

UBP8; VIT_06s0009g00890

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_06s0009g00890	VIT_06s0009g00890.t01	VIT_06s0009g00890.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.30e-108	362.9	284	878

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgye 88
           tGl+NlgNtC+mNS LQcL+++p+l +++l  +++++n+en  +++ge++ ++ +l+++lw    + v+pr+++++l+++a++fsg++
   Q: 284  TGLQNLGNTCFMNSSLQCLAHTPKLVDYFLGDYSREINHENALGMDGEIALAFGDLIRKLWAPGATPVAPRMFKSKLARFAPQFSGFN 371
           7*************************************************************************************** PP
   S: 89   qqDaqEflaflldqleeelkkeknkpkeeeeeed...kselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldls 173
           q+D+qE+laflld+l+e+l++ k kp+ e+++ +   ++e  de ++++  +n+s+i+d+ qgq++s+++c+ c++vs +++pf++ls
   Q: 372  QHDSQELLAFLLDGLHEDLNRVKCKPYIEAKDGEgwpDEEVADEYWRNHLARNDSIIVDVSQGQYRSTLVCPVCKKVSITFDPFMYLS 459
           *********************99999999988763335777788******************************************** PP
   S: 174  lpvpgkeetkke............................................................................ 185
           lp+p+ + + ++                                                                            
   Q: 460  LPLPSTTMRTMTltvvsadgitqpspctitvpkngkcedliqalssscylkddetllvaeiynnriiryledptdslslirdgdrlva 547
           ******9887779*************************************************************************** PP
   S: 186  ........................................................................................ 185
                                                                                                   
   Q: 548  yrlpkvtnedrlvvfmhqrideqyihgklssswkafgiplvaricnsvngsdvynlylklinpfqitsegisnnsdssektvieevke 635
           **************************************************************************************** PP
   S: 186  ........................................................................................ 185
                                                                                                   
   Q: 636  lkdaispvlsagvngineiwvdpdsdaelqfyltddkgatrasklvmdepvtrlprrlnllvfwpekkieqydthlisslpeifksgf 723
           **************************************************************************************** PP
   S: 186  .........slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.Ldlsp 263
                    sl  cLe+f kee l  ++++yc+ ck +++a+kkl+l++lPe+L++hLkRfs+s+   +++k++++v+fp   Ldls 
   Q: 724  iarrpqesvSLYRCLEAFLKEEPLGPDDMWYCPGCKTHRQASKKLDLWRLPEILVIHLKRFSYSR--FMKNKLETYVDFPVDnLDLST 809
           *************************************************************9977..799**********999***** PP
   S: 264  fctspeekqkekkkYeLiavvvHsGslssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           + t+++  +  +++Y L+av +H+Gs+++GHY+a+v +  ++W+ fdDs+V++++e+++++   s aYvlfY+r
   Q: 810  YITHKNGMV--SNRYMLYAVSNHYGSMGGGHYTAFVHHGGDQWYDFDDSHVSPIPEDKIKT---SAAYVLFYRR 878
           ****88777..9*************************************************...********98 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MDAPSEDLSD STHPQNDDVR VYFVPYRWWK EAQDSNLADG NAKRGVLYSA RPGSSYVGPM 60
KIINNIFNSD LVFNLRREED SGHSNENGEV GVSGRDYALV PGDLWLQALK WHTDSRVATK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCTC CCTCAGAAGA TCTCTCCGAT TCCACTCACC CGCAAAATGA CGATGTTCGG 60
GTCTACTTCG TTCCCTACAG GTCTCATCTC TCCACAGATT CACTCTCTTT TCACTTCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

vvi:100247876

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000058	Aegilops tauschii	48.45	0.00e+00	708.00
IUUC-Atr-002955	Amborella trichopoda	59.44	0.00e+00	975.00
IUUC-Aly-005456	Arabidopsis lyrata	62.03	0.00e+00	1074.00
IUUC-Ath-007677	Arabidopsis thaliana	61.98	0.00e+00	1057.00
IUUC-Bdi-014404	Brachypodium distachyon	52.77	0.00e+00	890.00
IUUC-Bol-015699	Brassica oleracea	65.11	0.00e+00	1112.00
IUUC-Bra-017554	Brassica rapa	64.75	0.00e+00	1119.00
IUUC-Cne-026852	Cryptococcus neoformans	47.16	2.00e-66	247.00
IUUC-Gma-043629	Glycine max	69.90	0.00e+00	1211.00
IUUC-Lpe-051047	Leersia perrieri	55.65	0.00e+00	925.00
IUUC-Mtr-058489	Medicago truncatula	68.81	0.00e+00	1195.00
IUUC-Mvi-060324	Microbotryum violaceum	48.87	4.00e-64	239.00
IUUC-Mac-065227	Musa acuminata	52.43	0.00e+00	808.00
IUUC-Oba-075553	Oryza barthii	50.00	0.00e+00	815.00
IUUC-Obr-076416	Oryza brachyantha	55.90	0.00e+00	897.00
IUUC-Ogl-077583	Oryza glaberrima	50.00	0.00e+00	815.00
IUUC-Ogu-078391	Oryza glumaepatula	52.06	0.00e+00	870.00
IUUC-Oin-079768	Oryza indica	53.80	0.00e+00	894.00
IUUC-Olo-080319	Oryza longistaminata	53.05	0.00e+00	845.00
IUUC-Ome-081819	Oryza meridionalis	54.26	0.00e+00	906.00
IUUC-Oni-082947	Oryza nivara	52.06	0.00e+00	879.00
IUUC-Opu-083846	Oryza punctata	51.04	0.00e+00	818.00
IUUC-Oru-084273	Oryza rufipogon	52.17	0.00e+00	880.00
IUUC-Osa-085641	Oryza sativa	50.11	0.00e+00	818.00
IUUC-Olu-087717	Ostreococcus lucimarinus	39.94	1.00e-126	446.00
IUUC-Pop-099333	Populus trichocarpa	72.73	0.00e+00	942.00
IUUC-Pca-100359	Procavia capensis	32.56	3.00e-76	279.00
IUUC-Ppe-102062	Prunus persica	72.51	0.00e+00	911.00
IUUC-Sce-106170	Saccharomyces cerevisiae	40.98	1.00e-56	214.00
IUUC-Spo-108291	Schizosaccharomyces pombe	36.90	2.00e-108	386.00
IUUC-Sit-109930	Setaria italica	55.22	0.00e+00	923.00
IUUC-Sly-111891	Solanum lycopersicum	66.90	0.00e+00	1109.00
IUUC-Sbi-114549	Sorghum bicolor	54.49	0.00e+00	884.00
IUUC-Tca-121598	Theobroma cacao	71.36	0.00e+00	1253.00
IUUC-Tae-125811	Triticum aestivum	54.72	0.00e+00	901.00
IUUC-Tur-126478	Triticum urartu	48.70	0.00e+00	719.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence