iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099141

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000352

Gene Name

POPTR_0016s03330g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s03330	POPTR_0016s03330.1	POPTR_0016s03330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.00e-06	27.6	515	566

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl 55
           e+f C+I + +++d v++ + +++ +++I+ +l++ +++cP++r +l+ +dl
   Q: 515  EDFDCAICYCPPTDAVITICKHVFCKRCIRTCLQRTRTSCPICRGRLSMSDL 566
           68*********************************************99998 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEVGYLHDQA SAALSPLIDA QMINLEGEVT DSRTGDVKYS VPCLVRVFSK STDLENVTQS 60
IFGNTLSLTG EPRTNPETNE GKGGKEKGRI EKLGTLEPPK EVIKAKLLDH QKVGLWWLVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGGAAATA TTCTTCTTCA CAACAAATCC GGTATAAAAC CAGCCATGTT TGTTCTTTTA 60
TAACCCATAT TGTGGGCCTC AGAAACCACC CTGCTATAGT ATTCAGTGAC CATGAATTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0016s03330g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000819	Aegilops tauschii	36.50	4.00e-122	431.00
IUUC-Aly-005898	Arabidopsis lyrata	47.72	0.00e+00	670.00
IUUC-Ath-007559	Arabidopsis thaliana	46.95	0.00e+00	672.00
IUUC-Bdi-014267	Brachypodium distachyon	44.27	2.00e-169	588.00
IUUC-Bol-016075	Brassica oleracea	47.52	0.00e+00	682.00
IUUC-Bra-017057	Brassica rapa	47.14	0.00e+00	671.00
IUUC-Lpe-051724	Leersia perrieri	48.79	5.00e-139	488.00
IUUC-Meu-056270	Macropus eugenii	34.98	5.00e-78	285.00
IUUC-Mtr-058172	Medicago truncatula	45.68	0.00e+00	649.00
IUUC-Mdo-062919	Monodelphis domestica	36.95	2.00e-85	310.00
IUUC-Oba-075881	Oryza barthii	49.53	1.00e-140	493.00
IUUC-Obr-076344	Oryza brachyantha	46.32	3.00e-153	534.00
IUUC-Ogl-076957	Oryza glaberrima	49.53	1.00e-140	493.00
IUUC-Ogu-078648	Oryza glumaepatula	50.00	7.00e-136	477.00
IUUC-Oin-079449	Oryza indica	49.72	5.00e-136	478.00
IUUC-Olo-080721	Oryza longistaminata	49.35	5.00e-135	474.00
IUUC-Ome-081579	Oryza meridionalis	49.72	9.00e-136	477.00
IUUC-Oni-083054	Oryza nivara	49.72	5.00e-136	478.00
IUUC-Opu-083706	Oryza punctata	49.53	5.00e-135	474.00
IUUC-Oru-085259	Oryza rufipogon	49.72	1.00e-135	476.00
IUUC-Osa-085568	Oryza sativa	48.61	1.00e-123	436.00
IUUC-Ppa-095291	Physcomitrella patens	39.33	3.00e-156	545.00
IUUC-Ppe-102077	Prunus persica	47.03	2.00e-180	625.00
IUUC-Sha-107221	Sarcophilus harrisii	37.27	4.00e-85	309.00
IUUC-Smo-109465	Selaginella moellendorffii	35.16	7.00e-138	484.00
IUUC-Sit-109770	Setaria italica	44.17	4.00e-165	574.00
IUUC-Tae-125897	Triticum aestivum	43.40	3.00e-165	575.00
IUUC-Tur-125973	Triticum urartu	44.26	2.00e-91	330.00
IUUC-Vvi-131204	Vitis vinifera	50.93	0.00e+00	745.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence