iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.2__2233__AT1G79380.1	fgenesh2_kg.2__2233__AT1G79380.1	fgenesh2_kg.2__2233__AT1G79380.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	64.90	2.00e-140	496.00	IUUC-Oin-079486

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MTMGNFLKRF GSGKSRSRSS RSMSLGTTSS QSHEPSPSAD PPVSLADKIN AAKKKYALIP 60
DRFSSLDQVS KALREAGLES SNLILGVDFT KSNEWTGKTS FDGKCLHALG ETPNPYEKAI 120

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Nucleotide Sequence
(Fasta)

ATATATAGTT TCATTTTTTT CTGGGTTTCG GTACTCATGT GGGTTCAGTA AATAAAAATG 60
TTTATAAGTC CCCATCTGGC CGCGTCAAAA ATACTAGATA ACAATTAGTG GTTGGCATAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010734--Copine
IPR002035--VWF_A
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF07002--Copine

SMART

SM00184--RING
SM00327--VWA

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0042742--P:defense response to bacterium
GO:0009867--P:jasmonic acid mediated signaling pathway
GO:0009611--P:response to wounding

KEGG

aly:ARALYDRAFT_477103

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000336	Aegilops tauschii	59.69	6.00e-135	473.00
IUUC-Ath-007046	Arabidopsis thaliana	93.56	0.00e+00	703.00
IUUC-Bdi-014120	Brachypodium distachyon	66.48	1.00e-138	485.00
IUUC-Bol-015590	Brassica oleracea	84.55	9.00e-178	615.00
IUUC-Bra-017517	Brassica rapa	89.97	0.00e+00	632.00
IUUC-Cin-025331	Ciona intestinalis	45.14	1.00e-60	225.00
IUUC-Csv-026082	Ciona savignyi	44.24	5.00e-59	219.00
IUUC-Gma-043431	Glycine max	66.94	3.00e-147	513.00
IUUC-Hvu-047280	Hordeum vulgare	66.39	3.00e-140	490.00
IUUC-Lpe-050854	Leersia perrieri	66.16	4.00e-129	454.00
IUUC-Mtr-057746	Medicago truncatula	69.91	7.00e-149	519.00
IUUC-Mac-064929	Musa acuminata	64.38	4.00e-135	473.00
IUUC-Oba-075646	Oryza barthii	65.46	4.00e-142	497.00
IUUC-Obr-076348	Oryza brachyantha	64.43	3.00e-139	487.00
IUUC-Ogl-077724	Oryza glaberrima	65.46	3.00e-142	497.00
IUUC-Ogu-078761	Oryza glumaepatula	64.61	3.00e-143	500.00
IUUC-Oin-079486	Oryza indica	64.90	5.00e-142	496.00
IUUC-Olo-080860	Oryza longistaminata	66.27	2.00e-132	464.00
IUUC-Ome-081961	Oryza meridionalis	64.62	1.00e-139	488.00
IUUC-Oni-082777	Oryza nivara	64.90	5.00e-142	496.00
IUUC-Opu-083462	Oryza punctata	63.96	3.00e-142	497.00
IUUC-Oru-084281	Oryza rufipogon	64.90	5.00e-142	496.00
IUUC-Osa-085996	Oryza sativa	64.90	6.00e-142	496.00
IUUC-Pop-099228	Populus trichocarpa	69.58	5.00e-141	493.00
IUUC-Ppe-101837	Prunus persica	66.58	2.00e-146	511.00
IUUC-Sit-109766	Setaria italica	66.67	6.00e-143	499.00
IUUC-Sly-111313	Solanum lycopersicum	67.61	1.00e-146	512.00
IUUC-Stu-112622	Solanum tuberosum	68.18	6.00e-148	516.00
IUUC-Sbi-114438	Sorghum bicolor	64.51	4.00e-142	496.00
IUUC-Tca-121234	Theobroma cacao	71.31	2.00e-154	538.00
IUUC-Tae-123953	Triticum aestivum	64.71	6.00e-140	489.00
IUUC-Tur-126574	Triticum urartu	68.18	1.00e-140	491.00
IUUC-Vvi-131358	Vitis vinifera	64.17	4.00e-134	470.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence