iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015264

Ensembl Protein ID

Bo7g109610.1

UniProt Accession

A0A0D3DFW2; A0A0D3DFW2_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo7g109610	Bo7g109610.1	Bo7g109610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.00e-76	259.8	549	854

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           +Gl N gN+C+ N v QcL+++ +l+ ++l+  +++++     +++++++++ ++kl+ +  k+ k++ sp+ ll++l+++  ++ + +q+Da+Efl
   Q: 549  CGLINCGNSCFANVVFQCLMFTAPLTTYFLQqLHSRTC-----PNKEQCFTCGFEKLVLKA-KEGKSSLSPNGLLSQLQSIGIRLGNGKQEDAHEFL 639
           7******************************4444444.....56789**********988.99999****************************** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLes 193
           +f++d++++ +         ++++ d        ++ kk + ++li  +F+g l+s+ikc +c+++s+r e+++dl++++ g+ +    +l+++L+ 
   Q: 640  RFVVDTMQSVCI--------KASGYD-------MPKTKKLEDTTLIGLTFGGYLRSKIKCMKCQEKSERLEKMMDLTVEIDGDIS----TLEEALRR 717
           ***********2........233333.......5677889999*****************************************6....7******* PP
   S: 194  ftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGsl 290
           ft++e l+genky+c +ck++ +a+kklk+++ P+vL++ LkRf   ++ ++  k+nk + fp++Ldl+p+++  +ek   ++ Y+L++v+vH  ++
   Q: 718  FTRTEILDGENKYKCGRCKSYERAKKKLKITEPPNVLTIALKRF---QS-GKFGKLNKLIRFPENLDLTPYVSGGSEK---SHDYKLYGVIVHLDTM 807
           ********************************************...33.4557*******************95544...8***********9987 PP
   S: 291  s...sGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +   sGHYv+yv+n+++kW++ dDs+V +++ e+vl+   + aY+lfY+r
   Q: 808  NaafSGHYVCYVRNSQNKWYKADDSTVVTSDVERVLT---KGAYMLFYER 854
           75558********************************...********98 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MLIVLDLGLS SLFLLISLVL PVVAFVVRRK WRLAALRREE IRRLLIHASE EAARAELESS 60
VEFSSVYVPN SFQCPVCYSP ASTRCSRCKA VRYCSGKCQI IHWRQGHRDE CHPASVLYNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTCATAG TTCTGGATCT CGGGCTTTCA AGTCTATTCC TTTTGATCTC TCTTGTTCTA 60
CCTGTAGTCG CCTTCGTTGT TAGGCGGAAA TGGAGGCTGG CTGCTCTGAG AAGGGAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000401	Aegilops tauschii	58.90	4.00e-125	442.00
IUUC-Atr-002920	Amborella trichopoda	58.63	4.00e-139	489.00
IUUC-Aly-005811	Arabidopsis lyrata	77.04	0.00e+00	1313.00
IUUC-Ath-006972	Arabidopsis thaliana	75.74	0.00e+00	1226.00
IUUC-Bra-017258	Brassica rapa	92.05	0.00e+00	1518.00
IUUC-Gma-044069	Glycine max	60.82	3.00e-152	532.00
IUUC-Hvu-047748	Hordeum vulgare	60.24	3.00e-121	429.00
IUUC-Mtr-058629	Medicago truncatula	56.38	3.00e-148	519.00
IUUC-Mac-065141	Musa acuminata	65.88	2.00e-134	473.00
IUUC-Oba-075163	Oryza barthii	58.82	3.00e-124	439.00
IUUC-Obr-076357	Oryza brachyantha	61.06	6.00e-125	441.00
IUUC-Ogl-077565	Oryza glaberrima	58.82	3.00e-124	439.00
IUUC-Ogu-078443	Oryza glumaepatula	58.82	2.00e-124	440.00
IUUC-Olo-080489	Oryza longistaminata	54.83	9.00e-118	417.00
IUUC-Oni-082570	Oryza nivara	58.82	4.00e-124	439.00
IUUC-Oru-084237	Oryza rufipogon	58.82	3.00e-124	439.00
IUUC-Osa-085297	Oryza sativa	58.82	3.00e-124	439.00
IUUC-Pop-098941	Populus trichocarpa	62.12	5.00e-155	541.00
IUUC-Sly-111806	Solanum lycopersicum	65.54	2.00e-145	509.00
IUUC-Sbi-114259	Sorghum bicolor	59.02	2.00e-124	439.00
IUUC-Tca-121756	Theobroma cacao	46.97	0.00e+00	666.00
IUUC-Tae-125220	Triticum aestivum	59.18	9.00e-126	444.00
IUUC-Tur-126736	Triticum urartu	58.90	3.00e-125	442.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence