iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006301

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348720

Gene Name

PUB15; ARALYDRAFT_917551

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_800951.1	scaffold_800951.1	scaffold_800951.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.50e-32	111.0	290	361

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p+eflCpI+le+M dPv++++G+ty+++sI+kw++ g+ktcP+trq+l++ +l Pn++l++li +wce+n+
   Q: 290  LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNYALKNLIMQWCEKNN 361
           599******************************************************************997 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVIVMDADEE STGDAENLEE EVTAEEPIHD EAVDAVEIHD EEVKNGDDDC DGLVSDIVSV 60
IEFLDQINGY RKTQQKECFN LVRRLKILIP FLEEIRGFDS PSCRHFVNRL RKVILVAKKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAAACGCG ATAGAGAGTC TCTAATGGTC ATTGTGATGG ACGCAGATGA AGAATCCACA 60
GGAGATGCAG AGAACCTTGA GGAAGAAGTT ACCGCAGAAG AACCGATCCA CGATGAGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_917551

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000563	Aegilops tauschii	53.81	0.00e+00	627.00
IUUC-Atr-002787	Amborella trichopoda	59.68	0.00e+00	704.00
IUUC-Ath-007379	Arabidopsis thaliana	94.24	0.00e+00	1179.00
IUUC-Bdi-014851	Brachypodium distachyon	55.08	6.00e-168	583.00
IUUC-Bol-016076	Brassica oleracea	86.02	0.00e+00	1093.00
IUUC-Bra-017350	Brassica rapa	88.15	0.00e+00	1048.00
IUUC-Csv-026196	Ciona savignyi	30.94	3.00e-12	67.40
IUUC-Gma-042863	Glycine max	64.60	0.00e+00	774.00
IUUC-Hvu-047325	Hordeum vulgare	54.26	2.00e-174	605.00
IUUC-Lpe-051266	Leersia perrieri	55.81	3.00e-167	581.00
IUUC-Mtr-058419	Medicago truncatula	62.11	0.00e+00	751.00
IUUC-Mac-064853	Musa acuminata	48.29	5.00e-152	530.00
IUUC-Oba-075533	Oryza barthii	54.53	3.00e-174	604.00
IUUC-Obr-076561	Oryza brachyantha	55.54	3.00e-177	614.00
IUUC-Ogl-077209	Oryza glaberrima	54.53	3.00e-174	604.00
IUUC-Ogu-078607	Oryza glumaepatula	54.70	1.00e-174	605.00
IUUC-Oin-080162	Oryza indica	54.70	1.00e-174	605.00
IUUC-Olo-080856	Oryza longistaminata	54.70	1.00e-174	605.00
IUUC-Ome-081763	Oryza meridionalis	54.70	4.00e-175	607.00
IUUC-Oni-082893	Oryza nivara	54.70	1.00e-174	605.00
IUUC-Opu-084068	Oryza punctata	54.94	9.00e-174	602.00
IUUC-Oru-085267	Oryza rufipogon	54.70	1.00e-174	605.00
IUUC-Osa-085448	Oryza sativa	54.70	1.00e-174	605.00
IUUC-Pop-099995	Populus trichocarpa	65.69	0.00e+00	793.00
IUUC-Ppe-101219	Prunus persica	69.69	0.00e+00	829.00
IUUC-Sit-110533	Setaria italica	54.66	0.00e+00	639.00
IUUC-Sly-111424	Solanum lycopersicum	59.87	0.00e+00	716.00
IUUC-Stu-112097	Solanum tuberosum	60.03	0.00e+00	716.00
IUUC-Sbi-114691	Sorghum bicolor	54.48	3.00e-163	568.00
IUUC-Tca-121852	Theobroma cacao	66.18	0.00e+00	771.00
IUUC-Tae-122916	Triticum aestivum	56.40	9.00e-174	602.00
IUUC-Tur-126004	Triticum urartu	57.36	2.00e-169	587.00
IUUC-Vvi-131187	Vitis vinifera	66.67	0.00e+00	720.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence