iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Cel-018504

Ensembl Protein ID

C44E4.1c

UniProt Accession

A0A0S4XR36; A0A0S4XR36_CAEEL

Genbank Protein ID

CUV67054.1

Protein Name

UBR E3 ubiquitin ligase homolog

Genbank Nucleotide ID

BX284601

Gene Name

C44E4.1; ubr-4; CELE_C44E4.1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00016650	C44E4.1a	C44E4.1a
WBGene00016650	C44E4.1c	C44E4.1c

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/N-recognin/UBR-box	25.64	4.00e-160	565.00	IUUC-Hsa-046955

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MPKSQKKNLA LYQNFGRHSK QDFIKILKFF YWKLLKNQTF SKFFATMQYI RIYDLTLHET 60
NFVEEMVLPA GNVEDVEIIN QEDGNVRILV LSSSGYLYEH NISVFNAENN SIFLTNVVNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCCGC GTGAAACGGC AATCGGACTT GTCCGATATG TCACCGAAAA TGCGGCAAAG 60
GATTTCGACG GAGAATCGAT TGCAGCAATT ATTTACAGAC TACGGGTTGT TGAAAATTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR004190--DNA_pol_proc_fac
IPR025704--E3_Ub_ligase_UBR4
IPR003126--Znf_UBR

PROSITE

PS51157--ZF_UBR

Pfam

PF02916--DNA_PPF
PF13764--E3_UbLigase_R4
PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding
GO:0006260--P:DNA replication

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000915	Aegilops tauschii	27.16	2.00e-60	229.00
IUUC-Aml-001346	Ailuropoda melanoleuca	27.51	4.00e-161	563.00
IUUC-Atr-002587	Amborella trichopoda	23.95	2.00e-30	129.00
IUUC-Apl-003678	Anas platyrhynchos	27.56	3.00e-166	580.00
IUUC-Aca-004517	Anolis carolinensis	29.97	7.00e-52	197.00
IUUC-Aly-006117	Arabidopsis lyrata	26.31	3.00e-44	174.00
IUUC-Ath-007289	Arabidopsis thaliana	26.53	1.00e-44	176.00
IUUC-Bta-012498	Bos taurus	27.51	2.00e-162	567.00
IUUC-Bdi-014555	Brachypodium distachyon	27.26	6.00e-61	230.00
IUUC-Bol-015522	Brassica oleracea	26.70	1.00e-48	189.00
IUUC-Bra-017090	Brassica rapa	25.74	2.00e-34	142.00
IUUC-Cja-018983	Callithrix jacchus	27.54	1.00e-162	568.00
IUUC-Cfa-020612	Canis familiaris	27.56	8.00e-163	568.00
IUUC-Cpo-021700	Cavia porcellus	27.49	4.00e-162	566.00
IUUC-Csa-023771	Chlorocebus sabaeus	27.54	5.00e-163	569.00
IUUC-Cho-024474	Choloepus hoffmanni	30.88	1.00e-95	345.00
IUUC-Cin-025247	Ciona intestinalis	30.48	1.00e-103	370.00
IUUC-Csv-026255	Ciona savignyi	29.60	2.00e-105	375.00
IUUC-Dre-028796	Danio rerio	25.91	1.00e-162	568.00
IUUC-Dno-030056	Dasypus novemcinctus	27.41	3.00e-160	560.00
IUUC-Dor-030711	Dipodomys ordii	28.68	1.00e-111	398.00
IUUC-Dme-032113	Drosophila melanogaster	30.95	1.00e-111	399.00
IUUC-Ete-032334	Echinops telfairi	28.42	7.00e-149	522.00
IUUC-Eca-033327	Equus caballus	27.65	2.00e-163	571.00
IUUC-Eeu-034698	Erinaceus europaeus	41.56	3.00e-48	188.00
IUUC-Fca-035430	Felis catus	27.50	3.00e-162	567.00
IUUC-Fal-037566	Ficedula albicollis	27.29	1.00e-164	574.00
IUUC-Gmo-038674	Gadus morhua	29.14	2.00e-94	342.00
IUUC-Gga-040641	Gallus gallus	27.54	2.00e-166	580.00
IUUC-Gac-041870	Gasterosteus aculeatus	30.13	2.00e-108	388.00
IUUC-Gma-042722	Glycine max	23.09	9.00e-31	130.00
IUUC-Ggo-045360	Gorilla gorilla	27.34	4.00e-159	556.00
IUUC-Hsa-046955	Homo sapiens	27.49	6.00e-162	566.00
IUUC-Hvu-047255	Hordeum vulgare	27.16	2.00e-60	228.00
IUUC-Itr-048714	Ictidomys tridecemlineatus	20.30	9.00e-11	62.80
IUUC-Lch-049893	Latimeria chalumnae	27.44	8.00e-160	558.00
IUUC-Lpe-050948	Leersia perrieri	26.22	4.00e-50	194.00
IUUC-Loc-052019	Lepisosteus oculatus	29.05	3.00e-84	307.00
IUUC-Laf-054238	Loxodonta africana	27.59	7.00e-162	565.00
IUUC-Mcc-054905	Macaca mulatta	27.54	8.00e-163	568.00
IUUC-Meu-056297	Macropus eugenii	26.47	2.00e-145	511.00
IUUC-Mtr-058169	Medicago truncatula	26.81	5.00e-47	184.00
IUUC-Mga-059621	Meleagris gallopavo	27.54	1.00e-166	581.00
IUUC-Mmr-061395	Microcebus murinus	28.83	4.00e-147	514.00
IUUC-Mdo-063037	Monodelphis domestica	27.43	2.00e-166	581.00
IUUC-Mmu-063200	Mus musculus	27.60	2.00e-161	564.00
IUUC-Mac-065267	Musa acuminata	24.49	2.00e-31	132.00
IUUC-Mpu-066639	Mustela putorius furo	27.49	3.00e-162	566.00
IUUC-Mlu-067172	Myotis lucifugus	27.94	5.00e-161	563.00
IUUC-Nle-069162	Nomascus leucogenys	27.38	1.00e-162	568.00
IUUC-Opr-070567	Ochotona princeps	27.93	1.00e-66	249.00
IUUC-Ont-072364	Oreochromis niloticus	29.82	8.00e-102	366.00
IUUC-Oan-072804	Ornithorhynchus anatinus	25.17	2.00e-58	219.00
IUUC-Ocu-074637	Oryctolagus cuniculus	27.61	8.00e-160	558.00
IUUC-Oba-075215	Oryza barthii	29.26	2.00e-28	122.00
IUUC-Obr-076704	Oryza brachyantha	27.49	8.00e-62	233.00
IUUC-Ogl-077593	Oryza glaberrima	29.48	2.00e-28	122.00
IUUC-Ogu-078732	Oryza glumaepatula	29.26	1.00e-28	123.00
IUUC-Oin-079805	Oryza indica	28.67	7.00e-32	134.00
IUUC-Olo-080261	Oryza longistaminata	29.26	2.00e-28	122.00
IUUC-Ome-081392	Oryza meridionalis	28.67	9.00e-32	133.00
IUUC-Oni-082086	Oryza nivara	29.26	2.00e-28	122.00
IUUC-Opu-083535	Oryza punctata	29.26	3.00e-28	122.00
IUUC-Oru-084735	Oryza rufipogon	29.26	2.00e-28	122.00
IUUC-Ola-086799	Oryzias latipes	29.73	3.00e-100	361.00
IUUC-Olu-087777	Ostreococcus lucimarinus	26.86	2.00e-52	201.00
IUUC-Oga-088126	Otolemur garnettii	29.87	7.00e-87	313.00
IUUC-Oar-090428	Ovis aries	27.18	4.00e-159	556.00
IUUC-Ptr-091407	Pan troglodytes	27.49	7.00e-162	565.00
IUUC-Pan-091777	Papio anubis	27.55	4.00e-162	566.00
IUUC-Psi-093587	Pelodiscus sinensis	26.99	1.00e-157	551.00
IUUC-Ppa-095781	Physcomitrella patens	27.64	2.00e-63	238.00
IUUC-Pfo-097449	Poecilia formosa	30.40	4.00e-105	377.00
IUUC-Pab-098450	Pongo abelii	27.49	2.00e-162	567.00
IUUC-Pop-100041	Populus trichocarpa	30.12	2.00e-27	119.00
IUUC-Pca-100663	Procavia capensis	27.26	8.00e-58	220.00
IUUC-Ppe-101386	Prunus persica	31.22	2.00e-27	119.00
IUUC-Pva-102701	Pteropus vampyrus	27.65	3.00e-132	467.00
IUUC-Rno-105367	Rattus norvegicus	27.65	5.00e-162	566.00
IUUC-Sha-107490	Sarcophilus harrisii	27.23	5.00e-166	579.00
IUUC-Smo-109103	Selaginella moellendorffii	27.20	2.00e-56	215.00
IUUC-Sit-110670	Setaria italica	27.68	2.00e-31	132.00
IUUC-Sly-110952	Solanum lycopersicum	23.46	3.00e-28	121.00
IUUC-Stu-112624	Solanum tuberosum	22.93	3.00e-27	116.00
IUUC-Sar-113180	Sorex araneus	27.62	7.00e-52	200.00
IUUC-Sbi-114596	Sorghum bicolor	27.04	4.00e-49	191.00
IUUC-Ssc-115377	Sus scrofa	28.83	1.00e-146	513.00
IUUC-Tgu-117330	Taeniopygia guttata	27.26	3.00e-165	577.00
IUUC-Tru-117635	Takifugu rubripes	29.77	1.00e-102	369.00
IUUC-Tsy-119551	Tarsius syrichta	30.86	4.00e-83	304.00
IUUC-Tni-119727	Tetraodon nigroviridis	29.66	2.00e-102	368.00
IUUC-Tca-121017	Theobroma cacao	25.44	1.00e-29	126.00
IUUC-Tae-122892	Triticum aestivum	29.25	1.00e-09	56.20
IUUC-Tur-126292	Triticum urartu	27.16	4.00e-60	227.00
IUUC-Ttr-128332	Tursiops truncatus	30.30	3.00e-98	354.00
IUUC-Vpa-130615	Vicugna pacos	54.30	1.00e-44	176.00
IUUC-Vvi-131435	Vitis vinifera	23.41	4.00e-29	125.00
IUUC-Xtr-132130	Xenopus tropicalis	23.07	1.00e-58	221.00
IUUC-Xma-133859	Xiphophorus maculatus	30.30	5.00e-105	377.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence