iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__3192__AT4G12570.1	fgenesh2_kg.6__3192__AT4G12570.1	fgenesh2_kg.6__3192__AT4G12570.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/HECT	2.40e-91	307.3	538	875
ULD/UDP/UBQ/UBQ_Other	2.50e-11	44.0	103	175

Active Site

Position(s)	Description	Evidence
843	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00104}

Domain Profile

E3 activity/HECT

   S: 3    sdlkkrlevefvgEegldlgGvtreflallskelqnpdlglflysendketlqpnpdsglknpehlklFeflGrllg 79
           ++l+  l++ef++Ee+++  Gv re+++l+++e++np+++lfl+s++d + ++pnp+s++ +p h ++Fef Gr+++
   Q: 538  EALHGGLFMEFKNEEATGP-GVLREWFYLVCQEIFNPKNTLFLRSADDFRRFSPNPASKV-DPLHPDFFEFTGRVIA 612
           6788899***********9.***************************************9.68************** PP
   S: 80   kalqdgrlldlplsksfyklllgkklsledleevdpelykslkeikena.esdieelgldltfsvseeilgetkeee 155
           +al+++  + + + ++f+ +l g k+sled++++d+ +y+s k+i+e++     +++gl ltf  ++e+lg++++ e
   Q: 613  LALMHKVQVGVLFDRVFFLQLAGLKISLEDIKDTDRIMYNSCKQILEMDpVFFDSNAGLGLTFVLETEELGKRDTIE 689
           *****************************************99999997544778889******************* PP
   S: 156  LkpgGenipVtneNkeeYvklvveyrlkegikeqveafreGfnev.....iplellslFteeelellicGe.eeidv 226
           L+pgG+   V+ eN+++Yv+l++e r+ + i eqv++f++Gf+++      p ++++ +  e+l+ ++ G  + i++
   Q: 690  LCPGGKFKAVNSENRKQYVDLLIERRFATPIFEQVKQFSRGFTDMlsdsiQPRSFFKRLYLEDLDGMLRGGeNPISI 766
           ******************************************99855553577899*************9989**** PP
   S: 227  edlkketkykggytedspaiqwFwevleefsseerkafLqFvTgssrlPlgGfaelkprlfvirkdasddrlPssnT 303
           +d+k++t+y+ g++e++++i+wFw++l+++++ee++ +L F+T+++ +P++Gf+ l+ +l+++r ++++drlP s+T
   Q: 767  DDWKAHTEYN-GFKETDRQIDWFWKILKKMTEEEQRSILFFWTSNKFVPVEGFRGLSSKLYIYRLYEANDRLPLSHT 842
           *********5.5***************************************************************** PP
   S: 304  CfnyLkLPeYsskeilkekL.lyAieet.kgFe 334
           Cf++L++P+Y++++ ++++L l+A ++  ++F+
   Q: 843  CFYRLCIPRYPTMTLMEQRLrLIAQDHVsSSFG 875
           ********************6677777666776 PP

ULD/UDP/UBQ/UBQ_Other

   S: 2    qvtvksldgs.eltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekk 73
           q++v+ + g  +  ++ ++ dtV +L e+ie k++ip+ +qr iykGk L+  ++La+y + ++  + l+ ++
   Q: 103  QIFVRMMSGGkTIVIHADKNDTVEKLHERIEWKTKIPVSEQRVIYKGKQLQYEHSLAYYSIEQDASLQLVGRM 175
           8999999999999999*****************************************************9876 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MTLSRSSAAD STNNSNRSYS AVAGTDHKRK LDDYDASSSP DYVGVVDFLQ KMKKHEIDAD 60
HMAASAQQTL ISWRSGENSG FNRSLSSSGE CSSSNRPEST RLQIFVRMMS GGKTIVIHAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGTGTTAAA CCCAGACGAA ACCTCCGATC TTCTTCTCCT CTCCAATCTC TTCATCTTCC 60
TCCTCCTCCT CCTCACCTCT GTACTCCGTT ACGGTTAATT TTCCGGCGAA ATCGATTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR000569--HECT_dom
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50237--HECT
PS50053--UBIQUITIN_2

Pfam

PF00632--HECT
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00119--HECTc
SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0010150--P:leaf senescence
GO:0042542--P:response to hydrogen peroxide
GO:0009753--P:response to jasmonic acid

KEGG

aly:ARALYDRAFT_490058

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000327	Aegilops tauschii	41.17	5.00e-149	521.00
IUUC-Atr-002891	Amborella trichopoda	41.42	1.00e-175	609.00
IUUC-Ath-007126	Arabidopsis thaliana	91.59	0.00e+00	1602.00
IUUC-Bdi-014613	Brachypodium distachyon	39.98	2.00e-160	558.00
IUUC-Bol-016237	Brassica oleracea	70.32	0.00e+00	1218.00
IUUC-Bra-017376	Brassica rapa	70.44	0.00e+00	1211.00
IUUC-Gma-043337	Glycine max	52.55	0.00e+00	840.00
IUUC-Hvu-047734	Hordeum vulgare	42.09	4.00e-162	564.00
IUUC-Lpe-051617	Leersia perrieri	40.32	6.00e-142	497.00
IUUC-Mtr-058709	Medicago truncatula	49.69	0.00e+00	744.00
IUUC-Mac-065415	Musa acuminata	42.60	1.00e-170	592.00
IUUC-Oba-075190	Oryza barthii	43.09	2.00e-137	482.00
IUUC-Obr-076197	Oryza brachyantha	40.89	2.00e-150	526.00
IUUC-Ogl-077892	Oryza glaberrima	38.60	2.00e-131	462.00
IUUC-Ogu-078711	Oryza glumaepatula	39.88	1.00e-140	493.00
IUUC-Oin-079504	Oryza indica	39.09	7.00e-137	480.00
IUUC-Olo-080730	Oryza longistaminata	43.09	3.00e-137	481.00
IUUC-Ome-081851	Oryza meridionalis	40.07	1.00e-143	503.00
IUUC-Oni-082230	Oryza nivara	39.88	1.00e-140	493.00
IUUC-Opu-084015	Oryza punctata	40.05	3.00e-142	498.00
IUUC-Oru-084327	Oryza rufipogon	39.88	1.00e-140	493.00
IUUC-Osa-086148	Oryza sativa	38.60	4.00e-132	464.00
IUUC-Ppa-095337	Physcomitrella patens	40.24	5.00e-172	598.00
IUUC-Pop-100027	Populus trichocarpa	53.07	0.00e+00	741.00
IUUC-Ppe-101443	Prunus persica	52.73	0.00e+00	865.00
IUUC-Smo-109099	Selaginella moellendorffii	39.70	5.00e-161	560.00
IUUC-Sit-110651	Setaria italica	40.44	6.00e-150	524.00
IUUC-Sly-111513	Solanum lycopersicum	50.37	0.00e+00	806.00
IUUC-Stu-112582	Solanum tuberosum	50.62	0.00e+00	814.00
IUUC-Sbi-114659	Sorghum bicolor	37.89	1.00e-111	397.00
IUUC-Tca-121392	Theobroma cacao	55.44	0.00e+00	876.00
IUUC-Tae-125860	Triticum aestivum	37.52	4.00e-134	471.00
IUUC-Tur-126774	Triticum urartu	44.51	2.00e-150	525.00
IUUC-Vvi-131149	Vitis vinifera	53.69	0.00e+00	846.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence