iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017229

Ensembl Protein ID

Bra013958.1-P

UniProt Accession

M4DBU8; M4DBU8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra013958	Bra013958.1	Bra013958.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	55.56	5.00e-11	66.60	IUUC-Hsa-046374
E3 activity/Other	55.56	3.00e-11	67.00	IUUC-Mmu-063344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MKGAGVKKKT QVVNDAGEAE TAVETAGGSG KRSGDGGFGS DDGGGGDSVL REMGDDRRTE 60
DEEEEEDDED EEDEEDGGGG GGGKEERPKL DEGFFEIEAI RRKRVRKGKV QYLIKWRGWP 120

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Nucleotide Sequence
(Fasta)

ATGAAAGGGG CAGGTGTGAA GAAGAAAACC CAGGTGGTGA ACGACGCTGG TGAGGCGGAG 60
ACGGCGGTGG AAACAGCCGG AGGAAGCGGG AAAAGAAGTG GAGACGGTGG GTTTGGAAGT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome

Interpro

IPR000953--Chromo/chromo_shadow_dom
IPR017984--Chromo_dom_subgr
IPR023780--Chromo_domain
IPR008251--Chromo_shadow_dom
IPR016197--Chromodomain-like
IPR023779--Chromodomain_CS

PROSITE

PS00598--CHROMO_1
PS50013--CHROMO_2

Pfam

PF00385--Chromo

PRINTS

PR00504--CHROMODOMAIN

SMART

SM00298--CHROMO
SM00300--ChSh

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003112	Amborella trichopoda	78.18	2.00e-24	106.00
IUUC-Aca-004445	Anolis carolinensis	50.00	9.00e-09	54.70
IUUC-Aly-006366	Arabidopsis lyrata	70.39	4.00e-108	384.00
IUUC-Ath-006608	Arabidopsis thaliana	65.27	5.00e-105	374.00
IUUC-Ame-010980	Astyanax mexicanus	53.33	7.00e-12	65.10
IUUC-Bta-013216	Bos taurus	55.56	1.00e-12	67.40
IUUC-Bdi-014604	Brachypodium distachyon	35.77	1.00e-47	183.00
IUUC-Bol-015449	Brassica oleracea	90.78	3.00e-154	537.00
IUUC-Cja-018821	Callithrix jacchus	50.00	3.00e-02	33.10
IUUC-Csa-024090	Chlorocebus sabaeus	55.56	2.00e-12	67.40
IUUC-Dre-027769	Danio rerio	53.33	7.00e-12	65.10
IUUC-Gmo-038639	Gadus morhua	55.56	3.00e-05	43.50
IUUC-Gga-040221	Gallus gallus	55.56	2.00e-12	66.60
IUUC-Gac-042105	Gasterosteus aculeatus	48.21	1.00e-12	67.40
IUUC-Ggo-044433	Gorilla gorilla	60.53	2.00e-11	63.90
IUUC-Hsa-046374	Homo sapiens	55.56	2.00e-12	67.40
IUUC-Hvu-047395	Hordeum vulgare	60.27	2.00e-20	93.20
IUUC-Itr-048523	Ictidomys tridecemlineatus	55.56	2.00e-12	67.40
IUUC-Lch-050606	Latimeria chalumnae	55.56	4.00e-12	66.20
IUUC-Loc-052513	Lepisosteus oculatus	55.56	3.00e-12	64.70
IUUC-Mmr-060774	Microcebus murinus	55.56	2.00e-12	67.00
IUUC-Mdo-062825	Monodelphis domestica	42.22	3.00e-04	39.70
IUUC-Mmu-063344	Mus musculus	55.56	2.00e-12	67.40
IUUC-Ont-071531	Oreochromis niloticus	50.00	2.00e-12	66.60
IUUC-Oba-075909	Oryza barthii	37.57	9.00e-50	190.00
IUUC-Obr-076678	Oryza brachyantha	68.49	5.00e-26	111.00
IUUC-Ogl-077833	Oryza glaberrima	37.57	6.00e-50	191.00
IUUC-Ogu-078599	Oryza glumaepatula	38.10	5.00e-50	191.00
IUUC-Oni-082564	Oryza nivara	68.49	7.00e-27	114.00
IUUC-Opu-083875	Oryza punctata	37.22	2.00e-49	189.00
IUUC-Oru-084465	Oryza rufipogon	36.77	2.00e-49	189.00
IUUC-Osa-085995	Oryza sativa	36.77	1.00e-49	189.00
IUUC-Ola-086942	Oryzias latipes	50.00	3.00e-12	66.60
IUUC-Oga-088509	Otolemur garnettii	55.56	3.00e-12	66.20
IUUC-Ptr-091416	Pan troglodytes	55.56	2.00e-12	67.40
IUUC-Pan-092459	Papio anubis	55.56	2.00e-12	67.40
IUUC-Pfo-096252	Poecilia formosa	50.00	2.00e-12	67.00
IUUC-Pca-100744	Procavia capensis	56.10	6.00e-11	62.00
IUUC-Pte-104285	Pyrenophora teres	36.51	1.00e-04	39.70
IUUC-Rno-105878	Rattus norvegicus	55.56	2.00e-12	67.00
IUUC-Sit-110439	Setaria italica	71.43	8.00e-24	103.00
IUUC-Sly-111669	Solanum lycopersicum	65.56	7.00e-31	128.00
IUUC-Stu-112251	Solanum tuberosum	61.54	8.00e-29	121.00
IUUC-Ssc-115965	Sus scrofa	55.56	2.00e-12	67.00
IUUC-Tgu-117367	Taeniopygia guttata	48.15	1.00e-09	57.80
IUUC-Tru-118259	Takifugu rubripes	57.78	2.00e-12	67.40
IUUC-Tni-120129	Tetraodon nigroviridis	57.78	2.00e-12	67.00
IUUC-Tae-124603	Triticum aestivum	39.19	3.00e-21	95.90
IUUC-Vvi-131282	Vitis vinifera	43.06	2.00e-60	225.00
IUUC-Xtr-132586	Xenopus tropicalis	44.16	5.00e-13	68.20
IUUC-Xma-133102	Xiphophorus maculatus	50.00	2.00e-12	66.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence