iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016626

Ensembl Protein ID

Bra040336.1-P

UniProt Accession

M4FGV8; M4FGV8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra040336	Bra040336.1	Bra040336.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	82.51	0.00e+00	1493.00	IUUC-Ath-006917

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSRRVRRKLD EKNKDKIVLL DWTSLDYDAV LHLFTCLNHR DRASLASTCK TWRALGASSC 60
LWTSLDLRPH KLNPSTATSL ASRCVHLRSL RFRGVESADS IINLKARNLL EVSGDYCRKI 120

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Nucleotide Sequence
(Fasta)

ATGAGTCGTA GAGTAAGGAG AAAGTTAGAT GAAAAAAACA AAGACAAGAT TGTTTTGCTT 60
GATTGGACTA GTTTAGATTA CGACGCAGTG CTTCACCTGT TCACTTGCTT AAACCACCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR001810--F-box_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

PROSITE

PS50176--ARM_REPEAT

Pfam

PF00514--Arm
PF00646--F-box

SMART

SM00185--ARM
SM00367--LRR_CC

Gene Ontology

GO:0005634--C:nucleus
GO:0048527--P:lateral root development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000414	Aegilops tauschii	70.50	6.00e-176	610.00
IUUC-Aml-002197	Ailuropoda melanoleuca	26.34	3.00e-11	62.80
IUUC-Atr-002711	Amborella trichopoda	67.48	0.00e+00	1123.00
IUUC-Aly-006252	Arabidopsis lyrata	84.10	0.00e+00	1492.00
IUUC-Ath-006917	Arabidopsis thaliana	82.51	0.00e+00	1477.00
IUUC-Bdi-014068	Brachypodium distachyon	66.44	0.00e+00	954.00
IUUC-Bol-015524	Brassica oleracea	95.26	0.00e+00	1669.00
IUUC-Cfa-020401	Canis familiaris	25.57	6.00e-12	65.10
IUUC-Cpo-022183	Cavia porcellus	23.55	5.00e-11	62.00
IUUC-Cin-025796	Ciona intestinalis	25.80	2.00e-17	84.70
IUUC-Csv-025821	Ciona savignyi	26.27	7.00e-17	82.80
IUUC-Dno-029222	Dasypus novemcinctus	23.46	1.00e-10	60.80
IUUC-Dor-030505	Dipodomys ordii	22.16	4.00e-11	62.00
IUUC-Dme-031688	Drosophila melanogaster	24.48	3.00e-16	79.70
IUUC-Eca-033944	Equus caballus	23.85	6.00e-11	61.60
IUUC-Eeu-035008	Erinaceus europaeus	25.60	2.00e-07	49.30
IUUC-Fca-035412	Felis catus	25.95	3.00e-12	65.90
IUUC-Gma-042966	Glycine max	73.05	0.00e+00	1200.00
IUUC-Ggo-045479	Gorilla gorilla	23.46	6.00e-11	61.60
IUUC-Hsa-046512	Homo sapiens	23.46	3.00e-11	62.40
IUUC-Hvu-047326	Hordeum vulgare	66.33	0.00e+00	869.00
IUUC-Lpe-051066	Leersia perrieri	60.45	0.00e+00	892.00
IUUC-Mtr-057820	Medicago truncatula	74.32	0.00e+00	1140.00
IUUC-Mmr-060660	Microcebus murinus	24.43	4.00e-11	62.40
IUUC-Mac-065669	Musa acuminata	70.77	0.00e+00	1120.00
IUUC-Mpu-065791	Mustela putorius furo	23.53	9.00e-12	64.30
IUUC-Nle-069823	Nomascus leucogenys	23.46	8.00e-11	61.20
IUUC-Oba-075240	Oryza barthii	68.83	0.00e+00	885.00
IUUC-Obr-076479	Oryza brachyantha	73.62	0.00e+00	722.00
IUUC-Ogl-077859	Oryza glaberrima	67.49	0.00e+00	981.00
IUUC-Ogu-078740	Oryza glumaepatula	67.95	0.00e+00	889.00
IUUC-Oin-079442	Oryza indica	76.14	0.00e+00	729.00
IUUC-Olo-080928	Oryza longistaminata	62.36	0.00e+00	770.00
IUUC-Ome-081689	Oryza meridionalis	67.38	0.00e+00	974.00
IUUC-Oni-083118	Oryza nivara	65.82	0.00e+00	971.00
IUUC-Opu-083603	Oryza punctata	65.35	0.00e+00	963.00
IUUC-Oru-085225	Oryza rufipogon	63.73	0.00e+00	966.00
IUUC-Osa-085817	Oryza sativa	74.54	0.00e+00	733.00
IUUC-Ptr-090743	Pan troglodytes	23.46	3.00e-11	62.40
IUUC-Ppa-095537	Physcomitrella patens	64.13	0.00e+00	935.00
IUUC-Pop-099168	Populus trichocarpa	80.11	0.00e+00	1259.00
IUUC-Ppe-102089	Prunus persica	78.10	0.00e+00	1239.00
IUUC-Pva-103181	Pteropus vampyrus	25.29	4.00e-11	62.00
IUUC-Smo-109321	Selaginella moellendorffii	64.37	0.00e+00	1019.00
IUUC-Sit-110607	Setaria italica	65.68	0.00e+00	957.00
IUUC-Sly-111773	Solanum lycopersicum	72.85	0.00e+00	905.00
IUUC-Sbi-114140	Sorghum bicolor	66.10	0.00e+00	959.00
IUUC-Ssc-115665	Sus scrofa	23.16	6.00e-11	61.60
IUUC-Tsy-119074	Tarsius syrichta	23.81	8.00e-11	61.20
IUUC-Tca-121125	Theobroma cacao	78.76	0.00e+00	1248.00
IUUC-Tae-125154	Triticum aestivum	65.80	0.00e+00	953.00
IUUC-Tur-126716	Triticum urartu	68.68	0.00e+00	749.00
IUUC-Vvi-131526	Vitis vinifera	76.18	0.00e+00	1210.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence