iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017694

Ensembl Protein ID

Bra020213.1-P

UniProt Accession

M4DUM0; M4DUM0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra020213	Bra020213.1	Bra020213.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.50e-08	35.0	1229	1278

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vC++C+ +++     + C+ C++w+H +  kl+ e++ p+   + C kCr+
   Q: 1229 VCWICKLPYNPRLTYIHCTSCDKWYHIEAIKLE-ESKIPEVAGFKCCKCRR 1278
           8*********98899******************.*******99******86 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEGKVARPRG RPRKRPRGED QNGVSNRGKR PVLEIKPAVP RSLLGSYVLK EFDDSRVSLG 60
KVVSYSSGLY RVEYEDGGFE DLKTCYLRKL IIGDGYFDDE LRCRRCKLDD LVMNKEEKKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGGGA AGGTAGCTAG ACCTAGAGGT AGACCTAGGA AACGCCCTAG GGGAGAGGAT 60
CAGAACGGTG TCTCTAACCG AGGAAAGAGA CCGGTTCTGG AGATTAAACC GGCTGTTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018501--DDT_dom
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02791--DDT
PF00628--PHD
PF15612--WHIM1

SMART

SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000221	Aegilops tauschii	32.31	2.00e-129	457.00
IUUC-Atr-002497	Amborella trichopoda	35.49	4.00e-130	459.00
IUUC-Aly-006239	Arabidopsis lyrata	66.50	0.00e+00	1985.00
IUUC-Ath-007124	Arabidopsis thaliana	78.83	0.00e+00	2424.00
IUUC-Acl-008313	Aspergillus clavatus	45.83	8.00e-09	55.80
IUUC-Bdi-014067	Brachypodium distachyon	39.86	6.00e-98	353.00
IUUC-Bol-016146	Brassica oleracea	91.78	0.00e+00	2915.00
IUUC-Gmo-038548	Gadus morhua	22.90	2.00e-15	79.30
IUUC-Gma-043696	Glycine max	44.23	0.00e+00	1194.00
IUUC-Hvu-047397	Hordeum vulgare	41.67	6.00e-100	359.00
IUUC-Lpe-051272	Leersia perrieri	29.98	7.00e-107	382.00
IUUC-Mor-056922	Magnaporthe oryzae	35.90	1.00e-08	55.80
IUUC-Mtr-058339	Medicago truncatula	42.78	0.00e+00	992.00
IUUC-Mac-065252	Musa acuminata	37.55	2.00e-172	600.00
IUUC-Oba-075125	Oryza barthii	31.76	2.00e-140	494.00
IUUC-Obr-076575	Oryza brachyantha	32.10	4.00e-135	476.00
IUUC-Ogl-077936	Oryza glaberrima	31.76	2.00e-140	494.00
IUUC-Ogu-078676	Oryza glumaepatula	32.30	8.00e-142	498.00
IUUC-Oin-079426	Oryza indica	29.83	9.00e-106	379.00
IUUC-Olo-080881	Oryza longistaminata	30.37	7.00e-109	389.00
IUUC-Ome-081742	Oryza meridionalis	30.02	3.00e-110	393.00
IUUC-Oni-082756	Oryza nivara	29.83	3.00e-106	380.00
IUUC-Opu-083405	Oryza punctata	32.56	1.00e-139	491.00
IUUC-Oru-084745	Oryza rufipogon	32.38	2.00e-141	497.00
IUUC-Pop-099219	Populus trichocarpa	46.60	0.00e+00	870.00
IUUC-Smo-108764	Selaginella moellendorffii	29.88	1.00e-125	444.00
IUUC-Sit-110379	Setaria italica	31.19	3.00e-124	440.00
IUUC-Sly-111813	Solanum lycopersicum	41.56	0.00e+00	1057.00
IUUC-Sbi-114633	Sorghum bicolor	31.80	2.00e-121	431.00
IUUC-Tca-121553	Theobroma cacao	51.06	0.00e+00	929.00
IUUC-Tae-125025	Triticum aestivum	33.67	1.00e-138	488.00
IUUC-Tur-125978	Triticum urartu	40.20	1.00e-105	378.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence