iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014118

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000883

Gene Name

BRADI_4g42660

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G42660	BRADI4G42660.1	BRADI4G42660.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-08	35.8	135	178

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpC..gHvfhadClqkwpglknssskefrCPlCr 46
           C iC e++   +++ v+pC   H+fh++Cl++w        ++ +CPlCr
   Q: 135  CVICIEEYevGEELSVVPCeyRHAFHRSCLEQW------LAQSRLCPLCR 178
           ********88445999***555***********......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MELDDAPSQH QLPAAGGVVL LVDDDNLSIE ERRLAAMYSE EELDMMPPPG FELGPGGSHG 60
QGGADVDLEW ASLVAVSLGV DVPVLGSAAA PVNSLPGTAI MEEAYAHGGF GALPASGYSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTTGG ACGACGCCCC CTCTCAGCAT CAGCTCCCAG CAGCGGGAGG CGTTGTTCTG 60
CTTGTAGACG ATGACAACCT AAGCATCGAG GAGCGCCGTC TCGCTGCAAT GTACAGCGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

bdi:104585189

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Oba-075208	Oryza barthii	43.01	4.00e-19	87.00
IUUC-Obr-076152	Oryza brachyantha	50.56	3.00e-21	94.70
IUUC-Ogl-077486	Oryza glaberrima	43.01	4.00e-19	87.00
IUUC-Ogu-078372	Oryza glumaepatula	61.67	6.00e-19	86.70
IUUC-Olo-080618	Oryza longistaminata	43.01	6.00e-19	86.30
IUUC-Ome-081676	Oryza meridionalis	54.05	1.00e-20	93.60
IUUC-Oni-082695	Oryza nivara	61.67	5.00e-19	87.00
IUUC-Opu-084036	Oryza punctata	54.65	5.00e-21	94.00
IUUC-Oru-084487	Oryza rufipogon	61.67	5.00e-19	87.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence