iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111421

Ensembl Protein ID

Solyc06g054540.2.1

UniProt Accession

K4C6E0; K4C6E0_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g054540.2	Solyc06g054540.2.1	Solyc06g054540.2.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	83.90	3.00e-134	474.00	IUUC-Ath-006798

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MEGSCNERLY FGKMGYGCEH YRRRCRIRAP CCNEVFDCRH CHNEATSLLR NIYDRHELVR 60
HDVKQVICSV CDTEQPVAHV CTNCGVNMGE YFCEVCKFYD DDTEKEQFHC DDCGICRVGG 120

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Nucleotide Sequence
(Fasta)

ATAAGTATTA ACCACTCTTA TCGTTGCAAT ATCCTAATGG GGTATGGCTG CATATAAAGA 60
TCGTTTGTCC CCTTATTATA ACGAAATGTC ATATTCACTT TGATTGAATT TTGGGTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR031109--Rinc_finger_CHY_Zinc_plant
IPR004039--Rubredoxin-type_fold
IPR018957--Znf_C3HC4_RING-type
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4
PF05495--zf-CHY

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0016567--P:protein ubiquitination

KEGG

sly:101266831

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002810	Amborella trichopoda	71.27	1.00e-111	394.00
IUUC-Aly-005693	Arabidopsis lyrata	84.27	1.00e-136	477.00
IUUC-Ath-006798	Arabidopsis thaliana	83.90	1.00e-135	474.00
IUUC-Bol-016370	Brassica oleracea	83.15	5.00e-134	469.00
IUUC-Bra-017136	Brassica rapa	83.52	3.00e-135	473.00
IUUC-Cpo-022137	Cavia porcellus	46.81	2.00e-35	140.00
IUUC-Eeu-034769	Erinaceus europaeus	33.79	4.00e-21	94.00
IUUC-Gma-044156	Glycine max	82.02	3.00e-133	466.00
IUUC-Hvu-047085	Hordeum vulgare	66.93	5.00e-98	349.00
IUUC-Mtr-057867	Medicago truncatula	81.65	2.00e-131	460.00
IUUC-Mac-065603	Musa acuminata	74.25	6.00e-118	415.00
IUUC-Oba-075296	Oryza barthii	67.19	6.00e-100	356.00
IUUC-Ogl-077845	Oryza glaberrima	67.19	6.00e-100	356.00
IUUC-Ogu-078026	Oryza glumaepatula	62.12	5.00e-95	339.00
IUUC-Oin-079551	Oryza indica	62.55	8.00e-97	345.00
IUUC-Olo-080782	Oryza longistaminata	65.49	2.00e-98	351.00
IUUC-Ome-081602	Oryza meridionalis	67.19	2.00e-99	354.00
IUUC-Oni-082797	Oryza nivara	67.59	2.00e-100	357.00
IUUC-Opu-083572	Oryza punctata	66.80	5.00e-99	353.00
IUUC-Oru-085188	Oryza rufipogon	67.59	6.00e-102	364.00
IUUC-Osa-085573	Oryza sativa	67.59	2.00e-100	357.00
IUUC-Pop-099126	Populus trichocarpa	81.68	5.00e-130	456.00
IUUC-Ppe-101325	Prunus persica	83.52	6.00e-134	469.00
IUUC-Sit-110031	Setaria italica	66.01	5.00e-100	356.00
IUUC-Stu-112471	Solanum tuberosum	88.01	4.00e-141	492.00
IUUC-Tca-121199	Theobroma cacao	85.60	2.00e-128	450.00
IUUC-Tae-125231	Triticum aestivum	67.48	3.00e-97	347.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence