iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-118213

Ensembl Protein ID

ENSTRUP00000009813.1

UniProt Accession

H2SBN4; H2SBN4_TAKRU

Protein Name

Uncharacterized protein

Gene Name

plxdc1; LOC101070481

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000004152.1	ENSTRUT00000009869.1	ENSTRUP00000009813.1
ENSTRUG00000004152.1	ENSTRUT00000009870.1	ENSTRUP00000009814.1
ENSTRUG00000004152.1	ENSTRUT00000009871.1	ENSTRUP00000009815.1
ENSTRUG00000004152.1	ENSTRUT00000009872.1	ENSTRUP00000009816.1
ENSTRUG00000004152.1	ENSTRUT00000009873.1	ENSTRUP00000009817.1
ENSTRUG00000004152.1	ENSTRUT00000009874.1	ENSTRUP00000009818.1
ENSTRUG00000004152.1	ENSTRUT00000009875.1	ENSTRUP00000009819.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/SH3	1.60e-13	51.6	220	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/SH3

   S: 4    ekvqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFvekl 62
           ++ q++y+y+a++ de +l++Gd +l +  e  d+gW+ g ++ +g+rGl+P+n+v+ +
   Q: 220  NRYQAMYSYMAAEADEVSLQEGDLILDV--EPIDAGWMFGSNQRTGQRGLLPANYVRPV 276
           5789*********************999..99************************976 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

ATMNPPCGRC NKPVYPTEKI NCLDKYWHKG CFSCEVCKMA LSMTTYKGFE KKPYCSMHYP 60
KTSFTIVTDT PENLRLKQQT QLNSQALYKE DFEKNRGKGF SVVVDTPEMQ RLKKTQDQIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCACGGACG GGGATCCGTC CAGCTTTTAC AGAACCGCAG GGAACCAGCG GCCTCCAGGC 60
AGACGCAGAG CCGTCCGAGA TGCACAGGCG GACCCGGGAC GGGAGCTGGA TCTCGGCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000900--Nebulin_repeat
IPR001452--SH3_domain
IPR001781--Znf_LIM

PROSITE

PS00478--LIM_DOMAIN_1
PS50023--LIM_DOMAIN_2
PS51216--NEBULIN
PS50002--SH3

Pfam

PF00412--LIM
PF00880--Nebulin
PF14604--SH3_9

PRINTS

PR00452--SH3DOMAIN

SMART

SM00132--LIM
SM00227--NEBU
SM00326--SH3

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000663	Aegilops tauschii	33.33	3.00e-05	43.10
IUUC-Atr-002465	Amborella trichopoda	26.67	3.00e-03	36.60
IUUC-Aly-005589	Arabidopsis lyrata	26.67	2.90e-02	33.50
IUUC-Ath-006630	Arabidopsis thaliana	38.64	7.00e-04	39.30
IUUC-Bol-015361	Brassica oleracea	26.67	5.90e-02	32.70
IUUC-Dor-031101	Dipodomys ordii	73.96	7.00e-34	137.00
IUUC-Gga-040435	Gallus gallus	50.36	6.00e-77	280.00
IUUC-Gac-041929	Gasterosteus aculeatus	62.41	8.00e-93	332.00
IUUC-Gma-042981	Glycine max	30.00	2.00e-05	44.30
IUUC-Hvu-047551	Hordeum vulgare	33.33	4.00e-05	43.10
IUUC-Lpe-050758	Leersia perrieri	33.33	9.00e-03	35.40
IUUC-Mtr-058103	Medicago truncatula	26.67	1.00e-03	38.10
IUUC-Mac-065516	Musa acuminata	36.11	2.00e-04	38.10
IUUC-Nle-069636	Nomascus leucogenys	60.33	5.00e-30	124.00
IUUC-Ont-071811	Oreochromis niloticus	62.95	9.00e-85	306.00
IUUC-Oba-075638	Oryza barthii	31.25	3.00e-04	40.00
IUUC-Obr-076045	Oryza brachyantha	31.25	3.00e-04	40.00
IUUC-Ogl-077659	Oryza glaberrima	31.25	3.00e-04	40.00
IUUC-Ogu-078055	Oryza glumaepatula	33.33	1.00e-02	34.70
IUUC-Oin-079541	Oryza indica	31.25	7.00e-04	38.90
IUUC-Oni-082309	Oryza nivara	33.33	9.00e-03	35.00
IUUC-Opu-083412	Oryza punctata	31.25	3.00e-04	40.00
IUUC-Oru-085213	Oryza rufipogon	33.33	9.00e-03	35.00
IUUC-Osa-085312	Oryza sativa	31.25	3.00e-04	40.00
IUUC-Ola-086749	Oryzias latipes	59.85	3.00e-89	321.00
IUUC-Ppa-096027	Physcomitrella patens	29.17	7.00e-03	35.80
IUUC-Pop-099698	Populus trichocarpa	31.25	1.00e-04	40.80
IUUC-Smo-108841	Selaginella moellendorffii	28.33	4.00e-04	38.90
IUUC-Sit-110147	Setaria italica	25.00	6.60e-02	32.30
IUUC-Sly-111106	Solanum lycopersicum	28.33	3.00e-03	36.60
IUUC-Stu-112570	Solanum tuberosum	28.33	2.00e-03	37.00
IUUC-Sbi-114441	Sorghum bicolor	29.17	3.00e-03	36.60
IUUC-Tni-120676	Tetraodon nigroviridis	97.50	6.00e-69	253.00
IUUC-Tca-121863	Theobroma cacao	28.33	3.00e-03	36.60
IUUC-Tae-123416	Triticum aestivum	33.33	3.00e-05	43.10
IUUC-Tur-126326	Triticum urartu	33.33	4.00e-05	43.10
IUUC-Vvi-131569	Vitis vinifera	26.67	2.10e-02	33.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence