iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-013291

Ensembl Protein ID

ENSBTAP00000028594.5

UniProt Accession

F1MVI8; F1MVI8_BOVIN

Genbank Protein ID

ENSBTAP00000028594

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02039320

Gene Name

DCAF13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000021449.5	ENSBTAT00000028594.5	ENSBTAP00000028594.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-13	48.8	64	103

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH d+v+cla    +  +++sG+ Dg +k+W+l++ ++++
   Q: 64   GHRDGVNCLAKnpKSlATVLSGACDGEVKIWNLTKRKCIR 103
           8*******9865322333788*************999987 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MKVKMLSRNP DHYVRETKLD LQRVPRNYDP TLHPFEVPRE YIRALNATKL ERVFAKPFLA 60
SLDGHRDGVN CLAKNPKSLA TVLSGACDGE VKIWNLTKRK CIRTIQAHEG FVRGICTRFC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGTAACTG GGGCCGGGAG AGAAAGGGTT GTGAGATCCC TGGAGAACTG GCAGCAAGAT 60
GAAGGTGAAG ATGCTGAGTC GGAACCCCGA CCACTATGTC CGCGAAACCA AATTGGACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0005813--C:centrosome
GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	69.02	6.00e-174	603.00
IUUC-Atr-002799	Amborella trichopoda	35.24	9.00e-81	293.00
IUUC-Apl-003675	Anas platyrhynchos	61.59	6.00e-152	530.00
IUUC-Aca-004792	Anolis carolinensis	61.54	5.00e-161	560.00
IUUC-Aly-005998	Arabidopsis lyrata	34.45	1.00e-78	286.00
IUUC-Ath-007526	Arabidopsis thaliana	34.68	3.00e-78	285.00
IUUC-Ago-007774	Ashbya gossypii	34.82	7.00e-68	251.00
IUUC-Acl-008024	Aspergillus clavatus	33.97	1.00e-60	227.00
IUUC-Afu-008930	Aspergillus fumigatus	39.05	4.00e-59	222.00
IUUC-Ani-009370	Aspergillus nidulans	36.39	5.00e-58	218.00
IUUC-Ang-009827	Aspergillus niger	34.62	5.00e-62	231.00
IUUC-Aor-010060	Aspergillus oryzae	36.57	5.00e-56	211.00
IUUC-Ate-010434	Aspergillus terreus	33.73	9.00e-47	180.00
IUUC-Ame-011967	Astyanax mexicanus	53.47	2.00e-134	471.00
IUUC-Bgr-011989	Blumeria graminis	35.12	7.00e-61	228.00
IUUC-Bci-013868	Botrytis cinerea	32.35	2.00e-57	216.00
IUUC-Bdi-014343	Brachypodium distachyon	37.96	2.00e-78	286.00
IUUC-Bol-015740	Brassica oleracea	32.21	6.00e-69	254.00
IUUC-Bra-016689	Brassica rapa	33.04	3.00e-68	252.00
IUUC-Cel-018536	Caenorhabditis elegans	37.87	2.00e-73	270.00
IUUC-Cja-018779	Callithrix jacchus	68.79	2.00e-177	615.00
IUUC-Cfa-020105	Canis familiaris	69.48	7.00e-179	619.00
IUUC-Cpo-021538	Cavia porcellus	67.88	1.00e-169	588.00
IUUC-Csa-023492	Chlorocebus sabaeus	68.79	8.00e-178	616.00
IUUC-Cho-024497	Choloepus hoffmanni	54.95	4.00e-91	328.00
IUUC-Cin-025524	Ciona intestinalis	46.70	1.00e-113	402.00
IUUC-Csv-026197	Ciona savignyi	46.47	2.00e-113	402.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	30.61	1.00e-49	191.00
IUUC-Cne-026840	Cryptococcus neoformans	26.56	9.00e-36	146.00
IUUC-Cme-027111	Cyanidioschyzon merolae	26.24	1.00e-34	140.00
IUUC-Dre-027471	Danio rerio	55.48	2.00e-141	495.00
IUUC-Dno-029790	Dasypus novemcinctus	74.07	4.00e-154	537.00
IUUC-Dor-030971	Dipodomys ordii	84.67	4.00e-135	474.00
IUUC-Dse-031563	Dothistroma septosporum	33.70	1.00e-59	223.00
IUUC-Dme-032161	Drosophila melanogaster	43.58	2.00e-103	369.00
IUUC-Ete-033127	Echinops telfairi	61.68	2.00e-155	542.00
IUUC-Eca-033531	Equus caballus	66.99	1.00e-162	565.00
IUUC-Eeu-034663	Erinaceus europaeus	55.10	1.00e-130	460.00
IUUC-Fca-036258	Felis catus	69.70	2.00e-179	621.00
IUUC-Fal-037456	Ficedula albicollis	64.69	2.00e-157	548.00
IUUC-Fox-038025	Fusarium oxysporum	32.57	4.00e-57	215.00
IUUC-Fso-038344	Fusarium solani	32.11	4.00e-55	208.00
IUUC-Gmo-039643	Gadus morhua	56.11	2.00e-143	502.00
IUUC-Ggr-039816	Gaeumannomyces graminis	35.85	5.00e-60	224.00
IUUC-Gga-040143	Gallus gallus	64.46	2.00e-163	568.00
IUUC-Gac-041665	Gasterosteus aculeatus	57.67	4.00e-150	524.00
IUUC-Gma-043073	Glycine max	36.48	9.00e-79	287.00
IUUC-Ggo-045058	Gorilla gorilla	68.34	1.00e-176	612.00
IUUC-Hsa-046843	Homo sapiens	68.56	6.00e-177	613.00
IUUC-Hvu-047654	Hordeum vulgare	33.33	4.00e-30	125.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	68.79	5.00e-178	617.00
IUUC-Kpa-049232	Komagataella pastoris	35.87	5.00e-74	271.00
IUUC-Lch-050542	Latimeria chalumnae	57.08	3.00e-153	535.00
IUUC-Lpe-051622	Leersia perrieri	36.34	7.00e-78	284.00
IUUC-Loc-052674	Lepisosteus oculatus	53.66	1.00e-134	472.00
IUUC-Lma-053108	Leptosphaeria maculans	33.93	6.00e-64	238.00
IUUC-Laf-053385	Loxodonta africana	68.34	2.00e-173	602.00
IUUC-Mcc-055151	Macaca mulatta	68.56	1.00e-177	615.00
IUUC-Meu-056230	Macropus eugenii	90.95	2.00e-119	422.00
IUUC-Mor-057013	Magnaporthe oryzae	32.41	4.00e-54	205.00
IUUC-Mpo-057530	Magnaporthe poae	35.61	5.00e-60	225.00
IUUC-Mtr-058187	Medicago truncatula	36.87	7.00e-79	287.00
IUUC-Mla-058964	Melampsora laricipopulina	32.72	3.00e-52	199.00
IUUC-Mga-059712	Meleagris gallopavo	63.25	6.00e-151	526.00
IUUC-Mvi-060370	Microbotryum violaceum	30.54	6.00e-27	115.00
IUUC-Mmr-061340	Microcebus murinus	64.11	2.00e-158	552.00
IUUC-Mdo-062978	Monodelphis domestica	65.60	1.00e-169	589.00
IUUC-Mmu-063439	Mus musculus	67.20	7.00e-172	596.00
IUUC-Mac-065129	Musa acuminata	35.92	3.00e-81	295.00
IUUC-Mpu-066548	Mustela putorius furo	61.88	5.00e-132	464.00
IUUC-Mlu-067660	Myotis lucifugus	68.56	6.00e-178	616.00
IUUC-Nfi-068455	Neosartorya fischeri	33.73	2.00e-61	229.00
IUUC-Ncr-068848	Neurospora crassa	31.43	2.00e-49	189.00
IUUC-Nle-069923	Nomascus leucogenys	68.79	3.00e-177	615.00
IUUC-Opr-070279	Ochotona princeps	60.21	2.00e-64	239.00
IUUC-Ont-072234	Oreochromis niloticus	56.72	2.00e-146	511.00
IUUC-Oan-073713	Ornithorhynchus anatinus	85.57	3.00e-102	363.00
IUUC-Ocu-073782	Oryctolagus cuniculus	68.11	2.00e-175	608.00
IUUC-Oba-075161	Oryza barthii	36.64	5.00e-79	288.00
IUUC-Obr-076868	Oryza brachyantha	36.30	1.00e-78	286.00
IUUC-Ogl-077062	Oryza glaberrima	36.64	5.00e-79	288.00
IUUC-Ogu-078308	Oryza glumaepatula	36.30	9.00e-79	287.00
IUUC-Oin-079378	Oryza indica	36.30	9.00e-79	287.00
IUUC-Olo-080638	Oryza longistaminata	33.18	6.00e-69	254.00
IUUC-Oni-082368	Oryza nivara	36.30	9.00e-79	287.00
IUUC-Opu-083628	Oryza punctata	36.30	9.00e-79	287.00
IUUC-Oru-085226	Oryza rufipogon	36.08	3.00e-78	285.00
IUUC-Osa-085368	Oryza sativa	44.87	7.00e-69	253.00
IUUC-Ola-086836	Oryzias latipes	58.54	1.00e-152	532.00
IUUC-Olu-087755	Ostreococcus lucimarinus	36.28	9.00e-79	287.00
IUUC-Oga-088170	Otolemur garnettii	68.79	1.00e-176	612.00
IUUC-Oar-089388	Ovis aries	71.53	0.00e+00	635.00
IUUC-Ptr-090494	Pan troglodytes	68.34	9.00e-177	613.00
IUUC-Pan-091697	Papio anubis	68.79	5.00e-178	617.00
IUUC-Psi-093916	Pelodiscus sinensis	62.87	1.00e-154	539.00
IUUC-Pno-095004	Phaeosphaeria nodorum	32.14	3.00e-55	209.00
IUUC-Ppa-095514	Physcomitrella patens	37.75	4.00e-83	301.00
IUUC-Pfo-097432	Poecilia formosa	59.03	9.00e-148	516.00
IUUC-Pab-098423	Pongo abelii	68.56	2.00e-177	615.00
IUUC-Pop-099649	Populus trichocarpa	36.32	1.00e-77	283.00
IUUC-Pca-100365	Procavia capensis	62.19	2.00e-151	528.00
IUUC-Ppe-101379	Prunus persica	35.32	6.00e-77	281.00
IUUC-Pva-102845	Pteropus vampyrus	69.02	5.00e-176	610.00
IUUC-Pgr-103469	Puccinia graminis	33.79	5.00e-28	119.00
IUUC-Ptt-103980	Puccinia triticina	23.56	9.00e-19	88.20
IUUC-Pte-104111	Pyrenophora teres	32.89	1.00e-61	230.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	32.89	9.00e-62	230.00
IUUC-Rno-105082	Rattus norvegicus	67.65	4.00e-176	610.00
IUUC-Sce-106340	Saccharomyces cerevisiae	34.78	7.00e-70	258.00
IUUC-Sha-106584	Sarcophilus harrisii	65.15	2.00e-168	585.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	32.19	3.00e-65	242.00
IUUC-Spo-108046	Schizosaccharomyces pombe	34.69	1.00e-64	240.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	32.58	4.00e-58	218.00
IUUC-Smo-109548	Selaginella moellendorffii	35.18	1.00e-76	280.00
IUUC-Sit-110242	Setaria italica	35.67	8.00e-76	277.00
IUUC-Sly-111762	Solanum lycopersicum	35.71	5.00e-80	291.00
IUUC-Stu-112156	Solanum tuberosum	35.56	1.00e-79	290.00
IUUC-Sbi-114739	Sorghum bicolor	36.57	4.00e-77	281.00
IUUC-Sre-114951	Sporisorium reilianum	30.75	2.00e-59	223.00
IUUC-Ssc-115510	Sus scrofa	69.02	1.00e-177	615.00
IUUC-Tgu-117234	Taeniopygia guttata	63.22	5.00e-145	507.00
IUUC-Tru-117986	Takifugu rubripes	57.92	2.00e-150	525.00
IUUC-Tsy-119252	Tarsius syrichta	64.67	1.00e-157	549.00
IUUC-Tni-119785	Tetraodon nigroviridis	59.71	8.00e-144	503.00
IUUC-Tca-121222	Theobroma cacao	34.30	1.00e-75	276.00
IUUC-Tre-122243	Trichoderma reesei	33.65	5.00e-56	211.00
IUUC-Tvi-122293	Trichoderma virens	32.41	5.00e-54	205.00
IUUC-Tae-124591	Triticum aestivum	36.50	5.00e-68	251.00
IUUC-Tur-126098	Triticum urartu	35.61	2.00e-63	236.00
IUUC-Tme-127200	Tuber melanosporum	36.91	6.00e-79	288.00
IUUC-Tbe-127568	Tupaia belangeri	77.97	2.00e-106	379.00
IUUC-Ttr-129185	Tursiops truncatus	63.55	1.00e-157	549.00
IUUC-Uma-129353	Ustilago maydis	30.16	2.00e-57	216.00
IUUC-Vda-129768	Verticillium dahliae	32.65	8.00e-55	207.00
IUUC-Vpa-130572	Vicugna pacos	69.25	5.00e-179	620.00
IUUC-Vvi-131555	Vitis vinifera	35.76	2.00e-76	279.00
IUUC-Xtr-132263	Xenopus tropicalis	66.67	1.00e-140	492.00
IUUC-Xma-133925	Xiphophorus maculatus	58.56	2.00e-148	518.00
IUUC-Yli-134384	Yarrowia lipolytica	34.77	6.00e-68	251.00
IUUC-Zma-135616	Zea mays	37.23	2.00e-77	283.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence