iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080462

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539203.1_FG001	KN539203.1_FGT001	KN539203.1_FGP001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-32	111.7	2	73

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           pe+flCpIs e+MrdPvvl+sG+tydr+ I++wl+ g++tcP t+q l+++ l+Pn+ +r++i +wc en++
   Q: 2    PEQFLCPISSEIMRDPVVLASGQTYDRRFIQEWLSAGNRTCPQTQQVLSNTILIPNHLVRSMIAQWCTENGI 73
           99*******************************************************************986 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MPEQFLCPIS SEIMRDPVVL ASGQTYDRRF IQEWLSAGNR TCPQTQQVLS NTILIPNHLV 60
RSMIAQWCTE NGIALSPLEN QEEDLVTNNE RKSFSELFDR ISSSSNISEK RQAIKDLRLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGAGC AGTTCCTCTG CCCTATCTCG TCGGAGATCA TGCGGGACCC CGTCGTGCTC 60
GCGTCCGGCC AGGTATAACC TCCGTTTTTT TCCCTGTGGG GGACTTGGGG CGGTTAGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006420	Arabidopsis lyrata	51.93	4.00e-114	404.00
IUUC-Ath-007457	Arabidopsis thaliana	51.67	3.00e-115	407.00
IUUC-Bdi-014069	Brachypodium distachyon	86.79	0.00e+00	663.00
IUUC-Bol-015764	Brassica oleracea	50.65	6.00e-109	386.00
IUUC-Bra-017759	Brassica rapa	51.16	8.00e-110	389.00
IUUC-Gma-043611	Glycine max	50.91	4.00e-110	390.00
IUUC-Lpe-050825	Leersia perrieri	94.55	0.00e+00	722.00
IUUC-Mtr-057877	Medicago truncatula	48.04	8.00e-108	383.00
IUUC-Mac-065616	Musa acuminata	68.39	5.00e-148	516.00
IUUC-Oba-075311	Oryza barthii	99.73	0.00e+00	729.00
IUUC-Obr-076232	Oryza brachyantha	96.24	0.00e+00	711.00
IUUC-Ogl-077647	Oryza glaberrima	99.48	0.00e+00	756.00
IUUC-Ogu-078448	Oryza glumaepatula	99.48	0.00e+00	756.00
IUUC-Oin-079693	Oryza indica	100.00	0.00e+00	731.00
IUUC-Ome-081796	Oryza meridionalis	99.48	0.00e+00	751.00
IUUC-Oni-082158	Oryza nivara	99.74	0.00e+00	757.00
IUUC-Opu-084131	Oryza punctata	98.44	0.00e+00	749.00
IUUC-Oru-084335	Oryza rufipogon	99.74	0.00e+00	757.00
IUUC-Osa-085556	Oryza sativa	99.74	0.00e+00	756.00
IUUC-Pop-099087	Populus trichocarpa	53.26	1.00e-111	395.00
IUUC-Ppe-101662	Prunus persica	54.66	8.00e-122	429.00
IUUC-Sit-110812	Setaria italica	84.11	0.00e+00	640.00
IUUC-Sly-110911	Solanum lycopersicum	51.70	2.00e-118	418.00
IUUC-Stu-112732	Solanum tuberosum	52.22	2.00e-119	421.00
IUUC-Sbi-114814	Sorghum bicolor	84.68	0.00e+00	652.00
IUUC-Tca-121080	Theobroma cacao	53.12	2.00e-122	431.00
IUUC-Vvi-131590	Vitis vinifera	54.55	7.00e-125	439.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence