iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__2078__AT3G18710.1	fgenesh2_kg.3__2078__AT3G18710.1	fgenesh2_kg.3__2078__AT3G18710.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.00e-28	99.9	12	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawce 70
           vp++f+CpIsl++Mr Pv l++G+tydr+sI++wl+ g++tcP t+q l+ +d+vPnltl+rli+ w +
   Q: 12   VPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQRLIKIWSD 80
           8******************************************************************86 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGRDETETYI TVPSFFKCPI SLDVMRSPVS LCTGVTYDRA SIQRWLDGGN NTCPATMQLL 60
KTKDFVPNLT LQRLIKIWSD SIGRYNTAGS PPPSGREVPT VEEVNVLLKR LMSLEKNDET 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAGAG ATGAAACTGA GACGTACATT ACAGTGCCAA GTTTCTTCAA ATGTCCTATA 60
TCTCTAGACG TTATGAGATC TCCGGTTAGT CTCTGCACCG GCGTTACTTA TGATCGAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0009506--C:plasmodesma
GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

KEGG

aly:ARALYDRAFT_479377

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006814	Arabidopsis thaliana	89.83	0.00e+00	690.00
IUUC-Bdi-014371	Brachypodium distachyon	69.05	7.00e-31	127.00
IUUC-Bol-015963	Brassica oleracea	79.06	2.00e-164	570.00
IUUC-Bra-017611	Brassica rapa	75.99	1.00e-173	601.00
IUUC-Lpe-050910	Leersia perrieri	76.81	6.00e-30	124.00
IUUC-Mac-064700	Musa acuminata	31.52	8.00e-49	187.00
IUUC-Obr-076177	Oryza brachyantha	76.81	7.00e-30	123.00
IUUC-Ogl-077051	Oryza glaberrima	79.37	1.00e-27	117.00
IUUC-Olo-080672	Oryza longistaminata	79.37	1.00e-27	115.00
IUUC-Opu-083818	Oryza punctata	76.81	2.00e-30	126.00
IUUC-Oru-085038	Oryza rufipogon	76.81	2.00e-30	126.00
IUUC-Osa-086178	Oryza sativa	76.81	1.00e-30	126.00
IUUC-Sit-110583	Setaria italica	76.81	7.00e-30	124.00
IUUC-Sbi-114135	Sorghum bicolor	76.81	5.00e-30	124.00
IUUC-Tae-123322	Triticum aestivum	75.00	5.00e-30	124.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence