iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113838

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G279000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g031560	Sb04g031560.1	Sb04g031560.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-09	38.0	105	147

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f++g   +vlp CgH+fha C+  w       + + +CP Cr
   Q: 105  CAICLAEFEEGqaMRVLPqCGHAFHAACVDTW------LRAHSSCPSCR 147
           ********77777999999*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MARILVEAPA GSGSPPEDSI NSDMILILAG LLCALVCVLG LGLVARCACS RRWATAASGR 60
SQPGSAKAAN KGVKKEVLRS LPTVTYVSDS CKAGDEEEGG GADECAICLA EFEEGQAMRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAGGA TACTCGTCGA AGCGCCCGCC GGCTCGGGCT CGCCGCCGGA GGACTCCATC 60
AACTCGGACA TGATCCTCAT CCTGGCCGGC CTGCTCTGCG CGCTCGTCTG CGTCCTCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g031560

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005492	Arabidopsis lyrata	52.38	7.00e-32	129.00
IUUC-Ath-006886	Arabidopsis thaliana	52.66	3.00e-31	126.00
IUUC-Bdi-014058	Brachypodium distachyon	60.53	7.00e-32	129.00
IUUC-Lpe-050964	Leersia perrieri	60.98	9.00e-48	182.00
IUUC-Mac-065309	Musa acuminata	57.01	2.00e-27	114.00
IUUC-Ome-081518	Oryza meridionalis	59.90	2.00e-42	164.00
IUUC-Oni-082929	Oryza nivara	67.17	1.00e-44	171.00
IUUC-Opu-083456	Oryza punctata	65.33	1.00e-38	151.00
IUUC-Oru-084952	Oryza rufipogon	65.46	1.00e-48	184.00
IUUC-Osa-086101	Oryza sativa	67.17	1.00e-44	171.00
IUUC-Pop-098856	Populus trichocarpa	50.64	8.00e-28	115.00
IUUC-Sit-110757	Setaria italica	77.20	9.00e-54	201.00
IUUC-Sly-111851	Solanum lycopersicum	50.83	3.00e-27	113.00
IUUC-Stu-112165	Solanum tuberosum	50.83	3.00e-27	113.00
IUUC-Tca-121004	Theobroma cacao	53.77	2.00e-27	114.00
IUUC-Tae-123615	Triticum aestivum	68.14	1.00e-35	141.00
IUUC-Vvi-131638	Vitis vinifera	51.56	3.00e-27	113.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence