iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114120

UUCD1 version

UUC-SoB-01727

Ensembl Protein ID

Sb04g031200.1

UniProt Accession

A0A194YS02; A0A194YS02_SORBI

Genbank Protein ID

KXG30971.1; KXG30972.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763; CM000763

Gene Name

SORBI_004G274900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g031200	Sb04g031200.1	Sb04g031200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.30e-58	198.8	212	451

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 69   sprellkalkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvss 164
             ++l+++++++++ f+  +q+Da+Efl++lld+l++                     ++++ ++    ++s+++++F+gql+s++ c ec+++s+
   Q: 212  LKNMLMNQFEELSSDFRPGQQEDAHEFLRCLLDNLHKCTL-----------------DPKSKGKDSSFDEESIVKEIFGGQLRSHLSCCECGHSSE 290
           456799*******************************991.................22334455667788************************* PP
   S: 165  reepfldlslpvpgkeetkkeslqdcLesftkeeeleg.enkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleL 259
           ++epfldlsl++ + +      l d+L+sftk e++ + enk+ ce+c++++  +k+l+l++ P+v+ +hLkRf+     +s eki+k+v +ple+
   Q: 291  TFEPFLDLSLEIDQVD-----HLVDALQSFTKVEHIGDsENKLTCESCNAQVCKNKQLTLHRAPDVIAFHLKRFT--TLDNSVEKIDKHVVYPLEV 379
           ****************.....89*************752788********************************4..4457889************ PP
   S: 260  dlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkrr 338
           dl+pf ++p+ +   + kY+L++vv HsG ++ GHYv+ ++++   W  +   +V +++ ++ l+   ++aY+lfY r+
   Q: 380  DLKPFYSNPDAAG--ELKYDLYGVVEHSGLPNYGHYVCAIRSSPSTWQDI--LQVDSITDSSALN---QEAYILFYVRQ 451
           ********99988..9**************************9999*877..8************...********875 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAEQDGAAGQ SPPDSVPGGA AENGDQNTKQ HQPFFSMCQP LRTVSYSNSW DGVCAPAANE 60
NNHTSGLNSM ADEHTITAST PLGSKQPQSE GISGTSYRED NSCSPHSINK EVSLVQDVME 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGAGC AGGACGGCGC CGCGGGGCAG AGCCCGCCCG ACTCCGTTCC GGTAAGATTC 60
GTTGCCTTTT GCTTGGGTTG GTTTGGACTC TCCGAGTTCC AGGTCCCGCT GGAGGCGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000766	Aegilops tauschii	54.56	0.00e+00	631.00
IUUC-Bdi-014605	Brachypodium distachyon	61.35	2.00e-143	501.00
IUUC-Bol-015783	Brassica oleracea	41.38	4.00e-56	211.00
IUUC-Hvu-047714	Hordeum vulgare	51.19	3.00e-171	594.00
IUUC-Lpe-051429	Leersia perrieri	56.77	6.00e-149	520.00
IUUC-Mtr-058720	Medicago truncatula	46.67	7.00e-68	250.00
IUUC-Oba-075717	Oryza barthii	49.73	1.00e-158	552.00
IUUC-Obr-076777	Oryza brachyantha	53.80	3.00e-80	291.00
IUUC-Ogl-077443	Oryza glaberrima	54.01	7.00e-175	606.00
IUUC-Ogu-078191	Oryza glumaepatula	49.73	1.00e-153	535.00
IUUC-Oin-079634	Oryza indica	50.14	1.00e-153	535.00
IUUC-Olo-081005	Oryza longistaminata	51.82	1.00e-58	220.00
IUUC-Ome-081886	Oryza meridionalis	52.65	1.00e-164	572.00
IUUC-Oni-082505	Oryza nivara	49.79	9.00e-153	533.00
IUUC-Opu-083445	Oryza punctata	55.54	1.00e-175	609.00
IUUC-Oru-085176	Oryza rufipogon	52.52	3.00e-163	567.00
IUUC-Pno-094986	Phaeosphaeria nodorum	29.29	2.00e-23	103.00
IUUC-Sit-110230	Setaria italica	75.81	0.00e+00	996.00
IUUC-Tae-125243	Triticum aestivum	51.51	1.00e-176	612.00
IUUC-Tur-126591	Triticum urartu	58.06	0.00e+00	673.00
IUUC-Vvi-131459	Vitis vinifera	51.96	2.00e-71	262.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence