iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099181

Ensembl Protein ID

POPTR_0015s08220.1

UniProt Accession

B9IEL7; B9IEL7_POPTR

Genbank Protein ID

EEF05689.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000351

Gene Name

POPTRDRAFT_251915; POPTR_0015s08220g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s08220	POPTR_0015s08220.1	POPTR_0015s08220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-31	108.7	186	223
UBD/Beta-Prp	6.00e-62	210.6	185	398

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v++la+ sd  +l s s+D tik+W++ ++++l 
   Q: 186  HVDTVSALALsSDeSHLYSVSWDRTIKIWRTNDFKCLE 223
           99*********999*******************99986 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvw....dlstgkcvhtlkgh 93
           hh + +++++ s d+s+l + s+d+tik+w++ + k+l+s+   h+++++av +s+dg    tgs D+ ikvw    + ++ + v tl++h
   Q: 185  HHVDTVSALALSSDESHLYSVSWDRTIKIWRTNDFKCLESVaNAHDDAINAVALSNDG-NVYTGSADKKIKVWrkssEENKHSLVATLEKH 274
           77788888999******************************999*************9.599***********8754444899999***** PP
   S: 94   edsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgght 180
            + + +l++s +g++l sG  dr i vw+ + +  +     l+gh++++ c++v +  +l++sGs+D+t+r+W+   ++ ++l  l+g h 
   Q: 275  MSGINALALSTDGSVLYSGACDRSIVVWEKDDDGNMVVlgALRGHTQSILCLAVVS--DLVFSGSADKTIRIWRGvdRSYSCLAVLEG-HG 362
           ****************************9888877776779***************..9***************999**********9.** PP
   S: 181  dsvysls.......fdsngkelvsgsldgtvklwdl 209
           ++v++l+        ++ ++ l sgsld ++k+w++
   Q: 363  GPVKCLTasidrrsSSDASFLLYSGSLDCDIKVWQI 398
           *******887776666666***************98 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSFHQTSYSD YDSQSHSDHL QANLPTLCSQ PSLPSVPFLT SKPHHRHQEI LSTTHHHCLT 60
TLKGHSSYIS SLTLAGKFLY SGSDKEIRLW KRNPLDSEID QENLSNNVVA VGNGAVKSLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTCTCCCC CCTCTCTAAC GTGGGAATCA TGTCATTCCA CCAGACTAGT TACTCAGATT 60
ATGATTCTCA ATCACACTCT GACCACCTTC AAGCAAACCT GCCTACACTT TGTTCGCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0015s08220g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014607	Brachypodium distachyon	47.33	3.00e-98	351.00
IUUC-Bol-016325	Brassica oleracea	57.34	3.00e-98	351.00
IUUC-Bra-017764	Brassica rapa	59.52	6.00e-109	386.00
IUUC-Cin-025279	Ciona intestinalis	27.27	4.00e-19	89.70
IUUC-Csv-026163	Ciona savignyi	28.28	2.00e-20	93.20
IUUC-Gma-043330	Glycine max	68.46	6.00e-145	506.00
IUUC-Hvu-047304	Hordeum vulgare	47.77	3.00e-95	341.00
IUUC-Lpe-050736	Leersia perrieri	47.28	3.00e-90	325.00
IUUC-Mtr-058728	Medicago truncatula	62.75	8.00e-135	473.00
IUUC-Mac-064538	Musa acuminata	54.06	6.00e-104	370.00
IUUC-Oba-075265	Oryza barthii	44.21	2.00e-69	255.00
IUUC-Obr-076628	Oryza brachyantha	43.40	1.00e-82	299.00
IUUC-Ogl-076961	Oryza glaberrima	45.06	6.00e-81	293.00
IUUC-Ogu-078745	Oryza glumaepatula	44.47	9.00e-87	313.00
IUUC-Oin-079355	Oryza indica	44.82	2.00e-79	288.00
IUUC-Olo-080540	Oryza longistaminata	44.39	9.00e-75	273.00
IUUC-Ome-081476	Oryza meridionalis	45.63	1.00e-80	293.00
IUUC-Oni-082952	Oryza nivara	44.71	2.00e-79	288.00
IUUC-Opu-083726	Oryza punctata	49.00	2.00e-90	325.00
IUUC-Oru-084480	Oryza rufipogon	44.58	1.00e-78	286.00
IUUC-Osa-086252	Oryza sativa	44.58	1.00e-78	286.00
IUUC-Ppe-101853	Prunus persica	73.09	1.00e-143	502.00
IUUC-Sit-109950	Setaria italica	49.73	3.00e-80	291.00
IUUC-Sly-111471	Solanum lycopersicum	60.45	2.00e-134	471.00
IUUC-Stu-112792	Solanum tuberosum	59.85	3.00e-128	451.00
IUUC-Sbi-114568	Sorghum bicolor	45.50	2.00e-80	292.00
IUUC-Tca-121089	Theobroma cacao	74.08	2.00e-165	574.00
IUUC-Tae-124515	Triticum aestivum	47.90	4.00e-94	337.00
IUUC-Tur-126500	Triticum urartu	48.03	8.00e-94	337.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence