iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017816

Ensembl Protein ID

Bra006875.1-P

UniProt Accession

M4CRN4; M4CRN4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra006875	Bra006875.1	Bra006875.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	3.50e-12	47.5	231	297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 2    DvilvvggeeffahkivLaasSsvFyalflmeleesksklmveikd..vqpevfrallkFlYtgklde 67
           D+ +++g+ee+++ ++ +a+ S++F+a+++++++e+k ++++++    ++ e +ra   F++t++ld 
   Q: 231  DMSFCIGDEEVRCVRYKIASLSRPFKAMLYGGFNEMK-RGTINFTHngISVEGMRAAEIFSRTKRLDD 297
           99***********************************.*******447******************95 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MQHQHNLFTT MRSLNLAEGC KGTQVYAPPP PPQPNNNATG GVGDKFLQHL QVHLRVNSIR 60
SKSSRTYPQA NVVVSPESLL PFGLPLTDLL EPRIDPSLKF PDLVDKMAQV YRRIDNCDQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGCATC AGCATAATCT ATTCACGACA ATGCGAAGTT TAAATCTTGC AGAAGGTTGC 60
AAAGGCACAC AAGTCTATGC ACCCCCTCCT CCTCCACAGC CTAATAACAA CGCGACCGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR008939--Lytic_TGlycosylase_superhlx_U
IPR011333--SKP1/BTB/POZ
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat

SMART

SM00225--BTB
SM00028--TPR

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002845	Amborella trichopoda	65.41	0.00e+00	1228.00
IUUC-Aly-005576	Arabidopsis lyrata	87.68	0.00e+00	1668.00
IUUC-Ath-006936	Arabidopsis thaliana	87.41	0.00e+00	1687.00
IUUC-Bdi-014047	Brachypodium distachyon	56.36	0.00e+00	1004.00
IUUC-Bol-016071	Brassica oleracea	98.31	0.00e+00	1843.00
IUUC-Gma-044270	Glycine max	71.19	0.00e+00	1366.00
IUUC-Hvu-047550	Hordeum vulgare	66.62	0.00e+00	862.00
IUUC-Lpe-051183	Leersia perrieri	55.36	0.00e+00	993.00
IUUC-Mtr-058783	Medicago truncatula	67.44	0.00e+00	1288.00
IUUC-Mac-065024	Musa acuminata	61.37	0.00e+00	1128.00
IUUC-Oba-075522	Oryza barthii	63.53	0.00e+00	941.00
IUUC-Obr-076036	Oryza brachyantha	65.67	0.00e+00	954.00
IUUC-Ogl-077017	Oryza glaberrima	56.24	0.00e+00	993.00
IUUC-Ogu-078743	Oryza glumaepatula	55.61	0.00e+00	978.00
IUUC-Oin-079854	Oryza indica	64.96	0.00e+00	940.00
IUUC-Olo-080413	Oryza longistaminata	62.54	0.00e+00	918.00
IUUC-Oni-082214	Oryza nivara	55.72	0.00e+00	979.00
IUUC-Oru-084626	Oryza rufipogon	55.72	0.00e+00	979.00
IUUC-Pop-100058	Populus trichocarpa	72.22	0.00e+00	1374.00
IUUC-Ppe-102041	Prunus persica	72.65	0.00e+00	1376.00
IUUC-Sit-109882	Setaria italica	55.62	0.00e+00	1005.00
IUUC-Sly-111831	Solanum lycopersicum	68.74	0.00e+00	1326.00
IUUC-Stu-112813	Solanum tuberosum	68.36	0.00e+00	1259.00
IUUC-Sbi-114510	Sorghum bicolor	55.15	0.00e+00	961.00
IUUC-Tca-121236	Theobroma cacao	74.76	0.00e+00	1453.00
IUUC-Tur-126646	Triticum urartu	64.21	0.00e+00	926.00
IUUC-Vvi-131058	Vitis vinifera	71.58	0.00e+00	1345.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence