iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022597

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS496157

Gene Name

CHLREDRAFT_178271

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_178271	EDO98401	EDO98401

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.90e-07	29.2	21	61

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCl+ +++ p  lpC H f+  C+ +++     + ++e  CP+Cr
   Q: 21   CPICLNIMDQ-PARLPCLHYFCWGCItHNV-----KPRGEVVCPVCR 61
           ********99.777************7666.....689********8 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MADVISEVES RIFELGKTLR CPICLNIMDQ PARLPCLHYF CWGCITHNVK PRGEVVCPVC 60
RARSNRRDIQ EDSLLATFTQ RYGQIEAALG KPLHLSQLPP LEPLEPAPAA TAAERLQQSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGACG TCATTTCAGA GGTCGAGGTC AGTGTCCTAT TAAGAGCTAG GAAAAACTGC 60
GTAGACAACA GTGCTGAGGG CCAGGCCTGC TGAAGGCATG AGTGGGGTCC AGCCAGGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR031099--BRCA1-associated
IPR001357--BRCT_dom
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50172--BRCT
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00292--BRCT
SM00184--RING

Gene Ontology

GO:0070531--C:BRCA1-A complex
GO:0031436--C:BRCA1-BARD1 complex
GO:0005886--C:plasma membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0000724--P:double-strand break repair via homologous recombination
GO:0045717--P:negative regulation of fatty acid biosynthetic process
GO:0035067--P:negative regulation of histone acetylation
GO:0071158--P:positive regulation of cell cycle arrest
GO:0035066--P:positive regulation of histone acetylation
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0042127--P:regulation of cell proliferation

KEGG

cre:CHLREDRAFT_178271

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000225	Aegilops tauschii	36.45	6.00e-15	74.70
IUUC-Aml-002388	Ailuropoda melanoleuca	31.91	4.00e-09	56.20
IUUC-Atr-002625	Amborella trichopoda	34.06	3.00e-16	79.30
IUUC-Apl-003252	Anas platyrhynchos	31.11	6.00e-09	55.80
IUUC-Aca-005106	Anolis carolinensis	32.88	3.00e-08	51.60
IUUC-Aly-005911	Arabidopsis lyrata	36.47	5.00e-07	47.40
IUUC-Ame-011348	Astyanax mexicanus	33.33	6.00e-09	53.90
IUUC-Bta-013433	Bos taurus	30.85	4.00e-09	56.60
IUUC-Bdi-014760	Brachypodium distachyon	29.17	9.00e-14	70.90
IUUC-Cel-018208	Caenorhabditis elegans	28.72	4.00e-09	54.70
IUUC-Cja-019944	Callithrix jacchus	34.57	1.00e-08	52.40
IUUC-Cfa-020322	Canis familiaris	31.91	3.00e-09	57.00
IUUC-Csa-023609	Chlorocebus sabaeus	31.71	3.00e-09	54.70
IUUC-Cho-024322	Choloepus hoffmanni	32.22	3.00e-08	50.40
IUUC-Csv-025987	Ciona savignyi	33.72	2.00e-08	51.60
IUUC-Cgl-026426	Colletotrichum gloeosporioides	50.00	5.00e-08	50.40
IUUC-Dre-027500	Danio rerio	32.93	6.00e-09	54.30
IUUC-Dno-029511	Dasypus novemcinctus	35.29	2.00e-11	60.80
IUUC-Dor-030700	Dipodomys ordii	50.00	1.00e-09	55.80
IUUC-Ete-033021	Echinops telfairi	32.14	2.00e-10	58.90
IUUC-Eca-034336	Equus caballus	34.18	8.00e-09	54.30
IUUC-Eeu-034979	Erinaceus europaeus	34.67	6.00e-08	50.40
IUUC-Fca-035991	Felis catus	32.50	3.00e-09	57.00
IUUC-Fal-036803	Ficedula albicollis	33.80	9.00e-09	55.10
IUUC-Gmo-038825	Gadus morhua	38.03	2.00e-09	55.10
IUUC-Gga-040969	Gallus gallus	30.99	8.00e-09	55.50
IUUC-Gac-042300	Gasterosteus aculeatus	36.99	6.00e-10	57.40
IUUC-Gma-044372	Glycine max	31.65	5.00e-08	52.40
IUUC-Hsa-046363	Homo sapiens	33.75	5.00e-10	57.40
IUUC-Hvu-047152	Hordeum vulgare	34.38	8.00e-07	46.60
IUUC-Itr-048118	Ictidomys tridecemlineatus	35.62	5.00e-08	50.80
IUUC-Lch-049789	Latimeria chalumnae	34.78	1.00e-09	58.20
IUUC-Lpe-050895	Leersia perrieri	33.66	2.00e-12	66.20
IUUC-Loc-052369	Lepisosteus oculatus	39.51	1.00e-09	56.60
IUUC-Lma-053014	Leptosphaeria maculans	41.07	9.00e-07	46.60
IUUC-Laf-054486	Loxodonta africana	34.21	8.00e-09	53.50
IUUC-Mcc-054743	Macaca mulatta	33.75	7.00e-10	57.00
IUUC-Mtr-058201	Medicago truncatula	30.26	5.00e-10	57.80
IUUC-Mga-060163	Meleagris gallopavo	29.41	3.00e-09	56.60
IUUC-Mmr-061023	Microcebus murinus	30.85	7.00e-11	60.10
IUUC-Mmu-063149	Mus musculus	29.33	2.00e-09	55.80
IUUC-Mac-065131	Musa acuminata	32.67	8.00e-13	67.80
IUUC-Mpu-065825	Mustela putorius furo	31.91	1.00e-10	60.10
IUUC-Mlu-068176	Myotis lucifugus	30.85	4.00e-09	56.20
IUUC-Nle-068980	Nomascus leucogenys	33.75	4.00e-10	57.80
IUUC-Opr-070981	Ochotona princeps	35.62	5.00e-08	50.80
IUUC-Ont-072453	Oreochromis niloticus	34.57	4.00e-10	57.80
IUUC-Oan-073243	Ornithorhynchus anatinus	36.76	7.00e-10	54.70
IUUC-Oba-075676	Oryza barthii	33.33	2.00e-09	56.60
IUUC-Obr-076308	Oryza brachyantha	28.57	2.00e-12	66.60
IUUC-Ogl-077654	Oryza glaberrima	33.33	2.00e-09	56.60
IUUC-Ogu-078659	Oryza glumaepatula	33.33	2.00e-09	56.60
IUUC-Oin-079086	Oryza indica	33.33	2.00e-09	56.60
IUUC-Oni-082502	Oryza nivara	33.33	2.00e-09	56.60
IUUC-Opu-083700	Oryza punctata	33.66	5.00e-12	65.10
IUUC-Oru-085093	Oryza rufipogon	33.33	2.00e-09	56.60
IUUC-Osa-086087	Oryza sativa	33.33	2.00e-09	56.60
IUUC-Ola-087244	Oryzias latipes	36.00	7.00e-10	57.00
IUUC-Olu-087666	Ostreococcus lucimarinus	28.40	9.00e-08	49.70
IUUC-Oga-088082	Otolemur garnettii	30.23	1.00e-08	50.80
IUUC-Oar-089938	Ovis aries	30.85	4.00e-09	56.20
IUUC-Ptr-091300	Pan troglodytes	33.75	4.00e-10	57.80
IUUC-Pan-092605	Papio anubis	33.75	5.00e-10	57.40
IUUC-Psi-093293	Pelodiscus sinensis	32.88	3.00e-08	51.60
IUUC-Pno-094854	Phaeosphaeria nodorum	43.48	2.00e-06	45.10
IUUC-Pfo-096082	Poecilia formosa	52.00	8.00e-11	59.70
IUUC-Pab-098535	Pongo abelii	33.75	5.00e-10	57.40
IUUC-Pva-102631	Pteropus vampyrus	30.85	2.00e-09	57.80
IUUC-Pte-104279	Pyrenophora teres	37.10	1.00e-05	43.90
IUUC-Pyt-104429	Pyrenophora triticirepentis	38.71	3.00e-06	45.10
IUUC-Rno-105761	Rattus norvegicus	33.78	6.00e-09	53.50
IUUC-Sha-107284	Sarcophilus harrisii	41.86	3.00e-07	47.80
IUUC-Spo-108067	Schizosaccharomyces pombe	34.15	1.00e-06	46.20
IUUC-Smo-108741	Selaginella moellendorffii	39.44	4.00e-08	47.00
IUUC-Sit-110609	Setaria italica	38.00	3.00e-15	75.90
IUUC-Sly-111863	Solanum lycopersicum	39.74	9.00e-12	64.30
IUUC-Stu-112154	Solanum tuberosum	37.18	1.00e-10	60.50
IUUC-Ssc-115846	Sus scrofa	31.18	1.00e-08	55.10
IUUC-Tgu-116785	Taeniopygia guttata	31.52	1.00e-09	58.20
IUUC-Tsy-119330	Tarsius syrichta	34.18	2.00e-10	58.50
IUUC-Tni-120205	Tetraodon nigroviridis	47.73	8.00e-09	52.80
IUUC-Tca-121809	Theobroma cacao	37.37	3.00e-12	65.10
IUUC-Tre-121992	Trichoderma reesei	51.16	1.00e-07	49.30
IUUC-Tvi-122557	Trichoderma virens	37.65	1.00e-04	39.30
IUUC-Tae-124838	Triticum aestivum	35.51	9.00e-15	74.30
IUUC-Tur-126725	Triticum urartu	35.51	9.00e-15	73.90
IUUC-Tbe-127955	Tupaia belangeri	36.25	2.00e-10	57.40
IUUC-Ttr-128233	Tursiops truncatus	35.62	5.00e-08	50.80
IUUC-Uma-129518	Ustilago maydis	36.92	3.00e-06	45.80
IUUC-Vda-129783	Verticillium dahliae	34.88	4.00e-08	50.80
IUUC-Vpa-130216	Vicugna pacos	31.91	2.00e-09	57.40
IUUC-Vvi-131586	Vitis vinifera	35.92	3.00e-11	63.20
IUUC-Xtr-132643	Xenopus tropicalis	34.15	6.00e-10	57.00
IUUC-Xma-133227	Xiphophorus maculatus	37.33	5.00e-10	57.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence