iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099693

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000354

Gene Name

POPTRDRAFT_262703; POPTR_0018s11680g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0018s11680	POPTR_0018s11680.1	POPTR_0018s11680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.40e-79	268.8	104	406

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqD 91
           Gl+NlgNtC++NSv+QcL+ +++l+ +l + k++++++         + l+++qk ++  ++s+ ++  p++l++ l+ ++++f++ +q+D
   Q: 104  GLENLGNTCFLNSVVQCLTYTEPLAAYLQSgKHQNSCHV-----AGFCALCAIQKHVSRALQSSGRSLVPKDLVSNLRCISRNFRNARQED 189
           9*****************************555555544.....46799999999999999****************************** PP
   S: 92   aqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeet 182
           a+E++  ll+++++ +                   s   +e++   +ksl++++F+g+l+sq+ c++c   s++++pfldlsl++ + +  
   Q: 190  AHEYMVNLLESMHKCC-----------------LPSGVPSESPAAYEKSLVHKIFGGHLRSQVECQQCSYCSNKFDPFLDLSLEIAKAD-- 261
           ****************.................223335568899999*****************************************.. PP
   S: 183  kkeslqdcLesftkeeelegenk.yycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekq 272
              +l  +L++ft++e l+g +k y+c++ck+k++a+k+l+++k P+vL++hLkRf   ++ +  +k++kkv f ++Ld++pf++ + e+ 
   Q: 262  ---TLPVALRNFTAAEVLDGGEKqYQCQRCKQKVRAKKRLTVHKAPHVLTIHLKRF---HAHDPGRKVDKKVIFDRSLDIKPFVSGSYEG- 345
           ...9**************986655********************************...4556789********************8877. PP
   S: 273  kekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
             + kY+L++v+vH+G +++sGHYv++v+ +++ W l++D++V++v+e++vle   ++aY+lfY r
   Q: 346  --ELKYSLYGVLVHYGhNTHSGHYVCFVRTSSNMWHLLNDNQVRQVSEKTVLE---QKAYMLFYVR 406
           ..79*************************************************...********87 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MRTEAELKME SGGNIENGSK DDSTLKRRIK FQLATKQYIG FKNNTSDFKI ETLNPGYNSR 60
KRPFAFEHHH PGQSVKKVDG SDFVENGLDP ELCFGISFRK IGAGLENLGN TCFLNSVVQC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTAGCAGC TTCTTTCCGC TTCTCCCTCC CAATCACCAA ACAAACAAAA TCCACCGATC 60
AACAACCACC TTTCCCCGCC TCTTCCACCA CCCCTCTCTC TAGATAATCA CTATTTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013087--Znf_C2H2_type

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF00443--UCH

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0018s11680g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000845	Aegilops tauschii	64.24	5.00e-108	385.00
IUUC-Aml-002092	Ailuropoda melanoleuca	46.25	5.00e-77	282.00
IUUC-Atr-003102	Amborella trichopoda	66.17	5.00e-155	541.00
IUUC-Apl-003459	Anas platyrhynchos	34.07	4.00e-73	269.00
IUUC-Aca-005360	Anolis carolinensis	37.89	8.00e-87	315.00
IUUC-Ame-011358	Astyanax mexicanus	46.33	9.00e-83	301.00
IUUC-Bta-013047	Bos taurus	46.67	4.00e-83	302.00
IUUC-Bdi-014036	Brachypodium distachyon	64.39	2.00e-149	523.00
IUUC-Bol-015645	Brassica oleracea	66.75	6.00e-155	541.00
IUUC-Bra-018046	Brassica rapa	63.76	3.00e-156	545.00
IUUC-Cja-019203	Callithrix jacchus	45.28	2.00e-81	296.00
IUUC-Cfa-020586	Canis familiaris	45.93	6.00e-77	282.00
IUUC-Cpo-021804	Cavia porcellus	45.93	3.00e-77	283.00
IUUC-Cre-022988	Chlamydomonas reinhardtii	46.40	2.00e-58	218.00
IUUC-Csa-023137	Chlorocebus sabaeus	45.93	1.00e-82	301.00
IUUC-Cho-024575	Choloepus hoffmanni	39.71	4.00e-54	206.00
IUUC-Cme-027339	Cyanidioschyzon merolae	37.19	7.00e-56	211.00
IUUC-Dre-028587	Danio rerio	46.06	4.00e-84	305.00
IUUC-Dno-029149	Dasypus novemcinctus	46.58	6.00e-78	285.00
IUUC-Dor-030836	Dipodomys ordii	33.84	7.00e-60	225.00
IUUC-Ete-033088	Echinops telfairi	41.18	4.00e-72	266.00
IUUC-Eca-033600	Equus caballus	47.23	1.00e-78	287.00
IUUC-Eeu-035019	Erinaceus europaeus	39.16	2.00e-57	215.00
IUUC-Fca-035792	Felis catus	44.73	8.00e-80	291.00
IUUC-Fal-036852	Ficedula albicollis	44.66	9.00e-75	274.00
IUUC-Gmo-039033	Gadus morhua	45.28	2.00e-82	300.00
IUUC-Gga-040664	Gallus gallus	46.10	2.00e-77	284.00
IUUC-Gac-042176	Gasterosteus aculeatus	45.60	1.00e-82	301.00
IUUC-Gma-043113	Glycine max	70.83	0.00e+00	632.00
IUUC-Ggo-045437	Gorilla gorilla	41.35	2.00e-77	284.00
IUUC-Hsa-046863	Homo sapiens	41.35	2.00e-77	283.00
IUUC-Hvu-047306	Hordeum vulgare	70.82	2.00e-109	388.00
IUUC-Itr-048655	Ictidomys tridecemlineatus	41.04	1.00e-82	301.00
IUUC-Lch-049867	Latimeria chalumnae	45.40	7.00e-82	298.00
IUUC-Loc-052796	Lepisosteus oculatus	46.03	1.00e-78	288.00
IUUC-Laf-054243	Loxodonta africana	46.91	7.00e-78	285.00
IUUC-Mcc-055762	Macaca mulatta	45.93	2.00e-82	300.00
IUUC-Meu-056697	Macropus eugenii	42.78	1.00e-78	288.00
IUUC-Mtr-058537	Medicago truncatula	59.66	2.00e-170	592.00
IUUC-Mla-059049	Melampsora laricipopulina	33.95	2.00e-51	197.00
IUUC-Mga-059501	Meleagris gallopavo	41.22	3.00e-70	259.00
IUUC-Mmr-060966	Microcebus murinus	46.58	1.00e-77	285.00
IUUC-Mdo-062733	Monodelphis domestica	42.86	6.00e-78	285.00
IUUC-Mmu-064331	Mus musculus	46.58	2.00e-78	286.00
IUUC-Mac-064815	Musa acuminata	66.43	9.00e-166	576.00
IUUC-Mpu-065759	Mustela putorius furo	45.93	5.00e-77	282.00
IUUC-Mlu-067371	Myotis lucifugus	41.43	2.00e-77	283.00
IUUC-Nle-069004	Nomascus leucogenys	44.73	1.00e-80	294.00
IUUC-Opr-070729	Ochotona princeps	34.16	2.00e-67	250.00
IUUC-Ont-071346	Oreochromis niloticus	46.25	6.00e-84	305.00
IUUC-Oan-072931	Ornithorhynchus anatinus	40.37	1.00e-81	297.00
IUUC-Ocu-074596	Oryctolagus cuniculus	44.20	1.00e-80	293.00
IUUC-Oba-075866	Oryza barthii	65.13	6.00e-149	521.00
IUUC-Obr-076408	Oryza brachyantha	65.45	3.00e-150	525.00
IUUC-Ogl-077239	Oryza glaberrima	65.38	4.00e-150	525.00
IUUC-Ogu-078064	Oryza glumaepatula	65.38	2.00e-150	525.00
IUUC-Oin-079157	Oryza indica	65.38	7.00e-150	524.00
IUUC-Olo-080231	Oryza longistaminata	58.96	6.00e-127	448.00
IUUC-Ome-081746	Oryza meridionalis	69.16	7.00e-146	510.00
IUUC-Oni-082339	Oryza nivara	65.38	8.00e-150	524.00
IUUC-Opu-083194	Oryza punctata	65.72	7.00e-148	518.00
IUUC-Oru-085083	Oryza rufipogon	65.38	6.00e-150	524.00
IUUC-Osa-086180	Oryza sativa	65.55	6.00e-150	524.00
IUUC-Ola-087255	Oryzias latipes	45.28	3.00e-83	303.00
IUUC-Olu-087773	Ostreococcus lucimarinus	48.73	2.00e-78	285.00
IUUC-Oar-089410	Ovis aries	46.50	1.00e-82	301.00
IUUC-Ptr-090680	Pan troglodytes	41.35	1.00e-77	284.00
IUUC-Pan-092482	Papio anubis	45.93	2.00e-82	300.00
IUUC-Psi-093277	Pelodiscus sinensis	45.69	1.00e-81	298.00
IUUC-Ppa-095853	Physcomitrella patens	60.84	3.00e-116	412.00
IUUC-Pfo-096807	Poecilia formosa	46.25	4.00e-84	306.00
IUUC-Pab-098724	Pongo abelii	41.35	1.00e-82	300.00
IUUC-Pca-100117	Procavia capensis	33.77	9.00e-39	155.00
IUUC-Ppe-101678	Prunus persica	49.22	0.00e+00	752.00
IUUC-Pva-103238	Pteropus vampyrus	38.66	9.00e-65	241.00
IUUC-Pgr-103270	Puccinia graminis	38.30	3.00e-58	219.00
IUUC-Ptt-103887	Puccinia triticina	36.55	1.00e-57	217.00
IUUC-Rno-105340	Rattus norvegicus	45.93	2.00e-77	283.00
IUUC-Sha-107019	Sarcophilus harrisii	42.86	2.00e-78	286.00
IUUC-Smo-108763	Selaginella moellendorffii	57.42	3.00e-101	360.00
IUUC-Sit-109895	Setaria italica	61.93	1.00e-148	520.00
IUUC-Sly-111722	Solanum lycopersicum	69.77	2.00e-155	542.00
IUUC-Sar-113340	Sorex araneus	44.73	4.00e-80	292.00
IUUC-Sbi-114477	Sorghum bicolor	61.63	3.00e-148	518.00
IUUC-Sre-114924	Sporisorium reilianum	40.12	9.00e-65	241.00
IUUC-Ssc-116022	Sus scrofa	46.98	3.00e-78	286.00
IUUC-Tgu-116976	Taeniopygia guttata	44.66	2.00e-72	265.00
IUUC-Tru-118391	Takifugu rubripes	46.58	5.00e-85	308.00
IUUC-Tsy-118974	Tarsius syrichta	41.83	3.00e-80	293.00
IUUC-Tni-120064	Tetraodon nigroviridis	46.58	2.00e-84	307.00
IUUC-Tae-124495	Triticum aestivum	63.14	1.00e-146	513.00
IUUC-Tur-126014	Triticum urartu	71.43	2.00e-133	469.00
IUUC-Tbe-127377	Tupaia belangeri	32.32	3.00e-45	176.00
IUUC-Ttr-129259	Tursiops truncatus	40.95	3.00e-61	229.00
IUUC-Uma-129416	Ustilago maydis	40.42	8.00e-66	244.00
IUUC-Vvi-131535	Vitis vinifera	51.52	0.00e+00	828.00
IUUC-Xtr-132544	Xenopus tropicalis	44.14	6.00e-82	297.00
IUUC-Xma-133735	Xiphophorus maculatus	46.25	4.00e-84	305.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence