iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tae-123176

Ensembl Protein ID

TRIAE_CS42_1AL_TGACv1_002826_AA0045390.1

UniProt Accession

A0A1D5RYG9; A0A1D5RYG9_WHEAT

Protein Name

Katanin p80 WD40 repeat-containing subunit B1 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_1AL_TGACv1_002826_AA0045390	TRIAE_CS42_1AL_TGACv1_002826_AA0045390.1	TRIAE_CS42_1AL_TGACv1_002826_AA0045390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-36	125.8	184	219
UBD/Beta-Prp	4.30e-54	186.4	14	263

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           H+++++cl+f +   ll++Gs D+t+k WDl t+ l
   Q: 184  HEGPINCLDFhPHeFLLATGSADKTVKFWDLETFEL 219
           9*********9776789**************99876 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrt 75
           +h s +tc kf ++ ++ ++tg++d+++ +w v +++++ slsgh+++v +++f++++ ++  g+  +t
   Q: 14   AHASDVTCAKFgKRTSRTFITGGEDQKVNLWAVGKPSAVLSLSGHTSPVESLSFDSSEVMIGAGAATGT 82
           67778899*************************************************9888888889** PP
   S: 76   ikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvv 144
           ik+wd++  k v+t++gh ++  sl+++p g++++sGs+d   ++wd++++ c++ t +gh+g + +++
   Q: 83   IKIWDIKEAKVVRTFTGHRSNCASLDSHPFGEFFASGSSDTNMKIWDMRKKRCIH-TYQGHTGRIDVLR 150
           *******************************************************.************* PP
   S: 145  vhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtge 213
           + pdg+ +vsG++D+ v++Wdl  gkll+++t  h++++++l+f++  + l++gs d+tvk+wdl+t e
   Q: 151  FTPDGRWIVSGGADSSVKIWDLTAGKLLHDFTL-HEGPINCLDFHPHEFLLATGSADKTVKFWDLETFE 218
           ********************************8.********************************555 PP
   S: 214  c........vrtlnghtdnvksvrfspnderlvsgssDgsiri..W 249
                     r++    + v+s+ f ++++ l +g  ++s+++  W
   Q: 219  LigssgpenCREYYMPASVVRSMTFNSDGKALFCGL-HESLKVlsW 263
           55555555589999999**************99995.555555445 PP

Organism

Triticum aestivum

Functional Description
(View)

May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.

Protein Sequence
(Fasta)

MATKRAYKLQ EFVAHASDVT CAKFGKRTSR TFITGGEDQK VNLWAVGKPS AVLSLSGHTS 60
PVESLSFDSS EVMIGAGAAT GTIKIWDIKE AKVVRTFTGH RSNCASLDSH PFGEFFASGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCGGTAAAA AGAACAAGAA AAACTCTCTA GAAAACCAAG AAATAACTCT TTTTTTACAA 60
TAACCAAGAA ATACTCTGCT GTGCTCTTTG GAGTTGCTTT TCCCCTCGCC CCTCTCTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13925--Katanin_con80
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000873	Aegilops tauschii	83.91	0.00e+00	1361.00
IUUC-Bdi-014552	Brachypodium distachyon	75.67	0.00e+00	1219.00
IUUC-Hvu-047781	Hordeum vulgare	88.53	0.00e+00	1454.00
IUUC-Lpe-051597	Leersia perrieri	67.64	0.00e+00	670.00
IUUC-Oba-075845	Oryza barthii	61.08	0.00e+00	1006.00
IUUC-Obr-076798	Oryza brachyantha	61.26	0.00e+00	1040.00
IUUC-Ogu-079022	Oryza glumaepatula	62.32	0.00e+00	1051.00
IUUC-Oin-080135	Oryza indica	62.88	0.00e+00	1055.00
IUUC-Olo-080665	Oryza longistaminata	60.79	0.00e+00	886.00
IUUC-Ome-081884	Oryza meridionalis	62.44	0.00e+00	1033.00
IUUC-Oni-082726	Oryza nivara	61.19	0.00e+00	1006.00
IUUC-Opu-083637	Oryza punctata	63.06	0.00e+00	1070.00
IUUC-Oru-085123	Oryza rufipogon	62.77	0.00e+00	1053.00
IUUC-Osa-086267	Oryza sativa	62.77	0.00e+00	1053.00
IUUC-Sit-109837	Setaria italica	58.59	0.00e+00	961.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence